Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB18PQ96TA0 U85056.1-201ENST00000616429 682 ntBASIC25.11■■□□□ 1.61
PCDHB18PQ96TA0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB18PQ96TA0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHB18PQ96TA0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB18PQ96TA0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHB18PQ96TA0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB18PQ96TA0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB18PQ96TA0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHB18PQ96TA0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHB18PQ96TA0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB18PQ96TA0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHB18PQ96TA0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHB18PQ96TA0 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHB18PQ96TA0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHB18PQ96TA0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB18PQ96TA0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHB18PQ96TA0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHB18PQ96TA0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB18PQ96TA0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 LINC01124-201ENST00000409786 2117 ntBASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 MIR6089-201ENST00000616698 64 ntBASIC25.06■■□□□ 1.6
PCDHB18PQ96TA0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB18PQ96TA0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHB18PQ96TA0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHB18PQ96TA0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
PCDHB18PQ96TA0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 FOXO3B-201ENST00000395675 1928 ntBASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 KRT18P10-201ENST00000388836 1287 ntBASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHB18PQ96TA0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 DUX4L9-201ENST00000449051 1259 ntBASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHB18PQ96TA0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 RPS2P7-201ENST00000447334 885 ntBASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PCDHB18PQ96TA0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB18PQ96TA0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 AC018755.3-202ENST00000596210 929 ntBASIC25■■□□□ 1.59
PCDHB18PQ96TA0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PCDHB18PQ96TA0 KRT18P60-201ENST00000312876 1297 ntBASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 AC129492.7-201ENST00000622992 756 ntBASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PCDHB18PQ96TA0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB18PQ96TA0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHB18PQ96TA0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHB18PQ96TA0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms