Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40CQ96S21 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB40CQ96S21 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40CQ96S21 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40CQ96S21 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40CQ96S21 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40CQ96S21 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB40CQ96S21 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40CQ96S21 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40CQ96S21 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB40CQ96S21 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB40CQ96S21 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40CQ96S21 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40CQ96S21 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RAB40CQ96S21 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40CQ96S21 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40CQ96S21 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB40CQ96S21 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40CQ96S21 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40CQ96S21 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB40CQ96S21 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RAB40CQ96S21 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RAB40CQ96S21 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40CQ96S21 AC004812.2-201ENST00000611079 2094 ntBASIC19.01■□□□□ 0.63
RAB40CQ96S21 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19■□□□□ 0.63
RAB40CQ96S21 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19■□□□□ 0.63
RAB40CQ96S21 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB40CQ96S21 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40CQ96S21 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19■□□□□ 0.63
RAB40CQ96S21 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40CQ96S21 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB40CQ96S21 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB40CQ96S21 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40CQ96S21 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40CQ96S21 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40CQ96S21 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB40CQ96S21 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB40CQ96S21 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB40CQ96S21 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RAB40CQ96S21 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40CQ96S21 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40CQ96S21 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
RAB40CQ96S21 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB40CQ96S21 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB40CQ96S21 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40CQ96S21 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB40CQ96S21 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40CQ96S21 LINC01971-201ENST00000617888 1048 ntBASIC18.96■□□□□ 0.63
RAB40CQ96S21 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40CQ96S21 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB40CQ96S21 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms