Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF4Q96M43 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
NBPF4Q96M43 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.54■■■□□ 2.64
NBPF4Q96M43 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.54■■■□□ 2.64
NBPF4Q96M43 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.54■■■□□ 2.64
NBPF4Q96M43 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
NBPF4Q96M43 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NBPF4Q96M43 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
NBPF4Q96M43 AF131216.4-201ENST00000638924 1588 ntBASIC31.53■■■□□ 2.64
NBPF4Q96M43 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NBPF4Q96M43 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.53■■■□□ 2.64
NBPF4Q96M43 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NBPF4Q96M43 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.52■■■□□ 2.64
NBPF4Q96M43 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NBPF4Q96M43 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.52■■■□□ 2.64
NBPF4Q96M43 MIR3621-201ENST00000580529 85 ntBASIC31.52■■■□□ 2.64
NBPF4Q96M43 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
NBPF4Q96M43 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.51■■■□□ 2.63
NBPF4Q96M43 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
NBPF4Q96M43 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
NBPF4Q96M43 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
NBPF4Q96M43 MIR6724-1-201ENST00000616420 92 ntBASIC31.5■■■□□ 2.63
NBPF4Q96M43 MIR6724-2-201ENST00000616483 92 ntBASIC31.5■■■□□ 2.63
NBPF4Q96M43 MIR6724-4-201ENST00000617390 92 ntBASIC31.5■■■□□ 2.63
NBPF4Q96M43 MIR6724-3-201ENST00000622482 92 ntBASIC31.5■■■□□ 2.63
NBPF4Q96M43 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.49■■■□□ 2.63
NBPF4Q96M43 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
NBPF4Q96M43 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
NBPF4Q96M43 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
NBPF4Q96M43 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF4Q96M43 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.48■■■□□ 2.63
NBPF4Q96M43 MIR935-201ENST00000401179 91 ntBASIC31.48■■■□□ 2.63
NBPF4Q96M43 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF4Q96M43 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF4Q96M43 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.48■■■□□ 2.63
NBPF4Q96M43 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.48■■■□□ 2.63
NBPF4Q96M43 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF4Q96M43 MTDHP2-201ENST00000601468 714 ntBASIC31.47■■■□□ 2.63
NBPF4Q96M43 AL139246.5-201ENST00000606645 996 ntBASIC31.47■■■□□ 2.63
NBPF4Q96M43 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.47■■■□□ 2.63
NBPF4Q96M43 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NBPF4Q96M43 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NBPF4Q96M43 FOXO3B-201ENST00000395675 1928 ntBASIC31.46■■■□□ 2.63
NBPF4Q96M43 AL136116.3-201ENST00000402907 1138 ntBASIC31.46■■■□□ 2.63
NBPF4Q96M43 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NBPF4Q96M43 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.46■■■□□ 2.63
NBPF4Q96M43 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NBPF4Q96M43 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
NBPF4Q96M43 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.45■■■□□ 2.63
NBPF4Q96M43 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
NBPF4Q96M43 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.45■■■□□ 2.63
NBPF4Q96M43 MIR4466-201ENST00000606121 54 ntBASIC31.45■■■□□ 2.63
NBPF4Q96M43 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.45■■■□□ 2.62
NBPF4Q96M43 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
NBPF4Q96M43 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NBPF4Q96M43 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
NBPF4Q96M43 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.44■■■□□ 2.62
NBPF4Q96M43 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.44■■■□□ 2.62
NBPF4Q96M43 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.44■■■□□ 2.62
NBPF4Q96M43 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.43■■■□□ 2.62
NBPF4Q96M43 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NBPF4Q96M43 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.43■■■□□ 2.62
NBPF4Q96M43 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NBPF4Q96M43 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NBPF4Q96M43 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.42■■■□□ 2.62
NBPF4Q96M43 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NBPF4Q96M43 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
NBPF4Q96M43 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NBPF4Q96M43 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.42■■■□□ 2.62
NBPF4Q96M43 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.42■■■□□ 2.62
NBPF4Q96M43 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NBPF4Q96M43 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NBPF4Q96M43 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
NBPF4Q96M43 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.41■■■□□ 2.62
NBPF4Q96M43 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC31.41■■■□□ 2.62
NBPF4Q96M43 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.41■■■□□ 2.62
NBPF4Q96M43 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NBPF4Q96M43 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NBPF4Q96M43 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NBPF4Q96M43 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NBPF4Q96M43 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
NBPF4Q96M43 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NBPF4Q96M43 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.39■■■□□ 2.62
NBPF4Q96M43 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.39■■■□□ 2.62
NBPF4Q96M43 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NBPF4Q96M43 AC110285.6-201ENST00000617652 491 ntBASIC31.39■■■□□ 2.62
NBPF4Q96M43 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.39■■■□□ 2.62
NBPF4Q96M43 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NBPF4Q96M43 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
NBPF4Q96M43 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NBPF4Q96M43 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms