Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE2Q96FN4 MIR7108-201ENST00000614319 87 ntBASIC20.33■□□□□ 0.85
CPNE2Q96FN4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE2Q96FN4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE2Q96FN4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CPNE2Q96FN4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.33■□□□□ 0.84
CPNE2Q96FN4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
CPNE2Q96FN4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.32■□□□□ 0.84
CPNE2Q96FN4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE2Q96FN4 KRT18P10-201ENST00000388836 1287 ntBASIC20.32■□□□□ 0.84
CPNE2Q96FN4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.32■□□□□ 0.84
CPNE2Q96FN4 AC092296.2-201ENST00000589470 999 ntBASIC20.32■□□□□ 0.84
CPNE2Q96FN4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE2Q96FN4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE2Q96FN4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPNE2Q96FN4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPNE2Q96FN4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 MIR639-201ENST00000384974 98 ntBASIC20.3■□□□□ 0.84
CPNE2Q96FN4 RP9P-202ENST00000450133 1212 ntBASIC20.3■□□□□ 0.84
CPNE2Q96FN4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPNE2Q96FN4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 AC141586.4-201ENST00000624558 1573 ntBASIC20.29■□□□□ 0.84
CPNE2Q96FN4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE2Q96FN4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE2Q96FN4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE2Q96FN4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE2Q96FN4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE2Q96FN4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE2Q96FN4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE2Q96FN4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 AC022413.1-201ENST00000624602 984 ntBASIC20.25■□□□□ 0.83
CPNE2Q96FN4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CPNE2Q96FN4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 LINC01124-201ENST00000409786 2117 ntBASIC20.24■□□□□ 0.83
CPNE2Q96FN4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE2Q96FN4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms