Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 AL157400.5-201ENST00000507624 621 ntBASIC19.35■□□□□ 0.69
R3HDM4Q96D70 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM4Q96D70 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM4Q96D70 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HDM4Q96D70 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
R3HDM4Q96D70 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM4Q96D70 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM4Q96D70 AC007029.1-201ENST00000604183 313 ntBASIC19.33■□□□□ 0.68
R3HDM4Q96D70 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM4Q96D70 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM4Q96D70 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM4Q96D70 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 AC133552.2-201ENST00000619106 1032 ntBASIC19.31■□□□□ 0.68
R3HDM4Q96D70 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HDM4Q96D70 AP003733.4-201ENST00000623785 1697 ntBASIC19.3■□□□□ 0.68
R3HDM4Q96D70 SMPD5-203ENST00000639008 1464 ntBASIC19.3■□□□□ 0.68
R3HDM4Q96D70 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
R3HDM4Q96D70 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HDM4Q96D70 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HDM4Q96D70 SLC6A10P-202ENST00000431994 2058 ntBASIC19.28■□□□□ 0.68
R3HDM4Q96D70 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HDM4Q96D70 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HDM4Q96D70 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HDM4Q96D70 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HDM4Q96D70 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
R3HDM4Q96D70 AL592293.1-201ENST00000502889 1188 ntBASIC19.27■□□□□ 0.68
R3HDM4Q96D70 DUX4L18-201ENST00000553347 1267 ntBASIC19.27■□□□□ 0.68
R3HDM4Q96D70 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms