Protein–RNA interactions for Protein: Q96A44

SPSB4, SPRY domain-containing SOCS box protein 4, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4Q96A44 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SPSB4Q96A44 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.34■□□□□ 0.85
SPSB4Q96A44 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.34■□□□□ 0.85
SPSB4Q96A44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPSB4Q96A44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPSB4Q96A44 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.33■□□□□ 0.85
SPSB4Q96A44 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPSB4Q96A44 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.33■□□□□ 0.84
SPSB4Q96A44 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.33■□□□□ 0.84
SPSB4Q96A44 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.33■□□□□ 0.84
SPSB4Q96A44 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPSB4Q96A44 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPSB4Q96A44 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
SPSB4Q96A44 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPSB4Q96A44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPSB4Q96A44 KRT18P60-201ENST00000312876 1297 ntBASIC20.32■□□□□ 0.84
SPSB4Q96A44 AC087393.1-201ENST00000582896 145 ntBASIC20.32■□□□□ 0.84
SPSB4Q96A44 AC129492.7-201ENST00000622992 756 ntBASIC20.32■□□□□ 0.84
SPSB4Q96A44 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
SPSB4Q96A44 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPSB4Q96A44 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.31■□□□□ 0.84
SPSB4Q96A44 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPSB4Q96A44 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.31■□□□□ 0.84
SPSB4Q96A44 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
SPSB4Q96A44 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPSB4Q96A44 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPSB4Q96A44 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPSB4Q96A44 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.31■□□□□ 0.84
SPSB4Q96A44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPSB4Q96A44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPSB4Q96A44 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPSB4Q96A44 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPSB4Q96A44 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
SPSB4Q96A44 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPSB4Q96A44 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.29■□□□□ 0.84
SPSB4Q96A44 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.29■□□□□ 0.84
SPSB4Q96A44 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.29■□□□□ 0.84
SPSB4Q96A44 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.29■□□□□ 0.84
SPSB4Q96A44 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPSB4Q96A44 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.29■□□□□ 0.84
SPSB4Q96A44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
SPSB4Q96A44 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPSB4Q96A44 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPSB4Q96A44 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPSB4Q96A44 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.28■□□□□ 0.84
SPSB4Q96A44 NTF6A-201ENST00000591175 560 ntBASIC20.28■□□□□ 0.84
SPSB4Q96A44 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.28■□□□□ 0.84
SPSB4Q96A44 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPSB4Q96A44 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SPSB4Q96A44 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SPSB4Q96A44 AC093323.1-202ENST00000635031 2045 ntBASIC20.27■□□□□ 0.84
SPSB4Q96A44 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPSB4Q96A44 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.27■□□□□ 0.84
SPSB4Q96A44 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPSB4Q96A44 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPSB4Q96A44 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPSB4Q96A44 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPSB4Q96A44 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
SPSB4Q96A44 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPSB4Q96A44 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPSB4Q96A44 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPSB4Q96A44 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPSB4Q96A44 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.25■□□□□ 0.83
SPSB4Q96A44 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPSB4Q96A44 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPSB4Q96A44 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPSB4Q96A44 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPSB4Q96A44 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.24■□□□□ 0.83
SPSB4Q96A44 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPSB4Q96A44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.24■□□□□ 0.83
SPSB4Q96A44 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPSB4Q96A44 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SPSB4Q96A44 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPSB4Q96A44 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SPSB4Q96A44 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPSB4Q96A44 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPSB4Q96A44 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPSB4Q96A44 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SPSB4Q96A44 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPSB4Q96A44 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPSB4Q96A44 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.22■□□□□ 0.83
SPSB4Q96A44 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms