Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 GPX1-201ENST00000419349 1106 ntBASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 AC133561.1-201ENST00000568600 2415 ntBASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.75■□□□□ 0.75
RTN4IP1Q8WWV3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 ECEL1P2-201ENST00000461596 1295 ntBASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4IP1Q8WWV3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 AC025884.2-201ENST00000553429 711 ntBASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 SMPD5-203ENST00000639008 1464 ntBASIC19.73■□□□□ 0.75
RTN4IP1Q8WWV3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN4IP1Q8WWV3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4IP1Q8WWV3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RTN4IP1Q8WWV3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4IP1Q8WWV3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTN4IP1Q8WWV3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 AC097639.1-201ENST00000565519 1891 ntBASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4IP1Q8WWV3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RTN4IP1Q8WWV3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 MIR3960-201ENST00000583311 91 ntBASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 SLC6A10P-202ENST00000431994 2058 ntBASIC19.69■□□□□ 0.74
RTN4IP1Q8WWV3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 AC012676.1-201ENST00000574705 1949 ntBASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 LINC00543-201ENST00000567234 1845 ntBASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4IP1Q8WWV3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTN4IP1Q8WWV3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.66■□□□□ 0.74
RTN4IP1Q8WWV3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RTN4IP1Q8WWV3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4IP1Q8WWV3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4IP1Q8WWV3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms