Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 AL031848.2-201ENST00000607670 837 ntBASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSMEM1Q8WWF3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.39■□□□□ 0.7
SSMEM1Q8WWF3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSMEM1Q8WWF3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSMEM1Q8WWF3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSMEM1Q8WWF3 AC093323.1-202ENST00000635031 2045 ntBASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 LONRF2P2-201ENST00000439212 571 ntBASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 AC103724.3-201ENST00000564481 992 ntBASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSMEM1Q8WWF3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSMEM1Q8WWF3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSMEM1Q8WWF3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSMEM1Q8WWF3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSMEM1Q8WWF3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSMEM1Q8WWF3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 AC022616.5-201ENST00000518796 181 ntBASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSMEM1Q8WWF3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSMEM1Q8WWF3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSMEM1Q8WWF3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSMEM1Q8WWF3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSMEM1Q8WWF3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSMEM1Q8WWF3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms