Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.21■■□□□ 1.15
CT55Q8WUE5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.21■■□□□ 1.15
CT55Q8WUE5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.21■■□□□ 1.15
CT55Q8WUE5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CT55Q8WUE5 MTDHP2-201ENST00000601468 714 ntBASIC22.21■■□□□ 1.15
CT55Q8WUE5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.21■■□□□ 1.15
CT55Q8WUE5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CT55Q8WUE5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CT55Q8WUE5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.2■■□□□ 1.15
CT55Q8WUE5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.2■■□□□ 1.15
CT55Q8WUE5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CT55Q8WUE5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.2■■□□□ 1.14
CT55Q8WUE5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.2■■□□□ 1.14
CT55Q8WUE5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CT55Q8WUE5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.19■■□□□ 1.14
CT55Q8WUE5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 FOXO3B-201ENST00000395675 1928 ntBASIC22.19■■□□□ 1.14
CT55Q8WUE5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CT55Q8WUE5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CT55Q8WUE5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
CT55Q8WUE5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.18■■□□□ 1.14
CT55Q8WUE5 AC131281.2-201ENST00000520478 145 ntBASIC22.18■■□□□ 1.14
CT55Q8WUE5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CT55Q8WUE5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CT55Q8WUE5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CT55Q8WUE5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.17■■□□□ 1.14
CT55Q8WUE5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.17■■□□□ 1.14
CT55Q8WUE5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.17■■□□□ 1.14
CT55Q8WUE5 AL117332.1-201ENST00000622628 974 ntBASIC22.17■■□□□ 1.14
CT55Q8WUE5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CT55Q8WUE5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CT55Q8WUE5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CT55Q8WUE5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CT55Q8WUE5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CT55Q8WUE5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CT55Q8WUE5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.16■■□□□ 1.14
CT55Q8WUE5 MIR6724-1-201ENST00000616420 92 ntBASIC22.16■■□□□ 1.14
CT55Q8WUE5 MIR6724-2-201ENST00000616483 92 ntBASIC22.16■■□□□ 1.14
CT55Q8WUE5 MIR6724-4-201ENST00000617390 92 ntBASIC22.16■■□□□ 1.14
CT55Q8WUE5 MIR6724-3-201ENST00000622482 92 ntBASIC22.16■■□□□ 1.14
CT55Q8WUE5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CT55Q8WUE5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CT55Q8WUE5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CT55Q8WUE5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CT55Q8WUE5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CT55Q8WUE5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.15■■□□□ 1.14
CT55Q8WUE5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.14■■□□□ 1.14
CT55Q8WUE5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CT55Q8WUE5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CT55Q8WUE5 AF131216.4-201ENST00000638924 1588 ntBASIC22.14■■□□□ 1.13
CT55Q8WUE5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CT55Q8WUE5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.13■■□□□ 1.13
CT55Q8WUE5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.13■■□□□ 1.13
CT55Q8WUE5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CT55Q8WUE5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CT55Q8WUE5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CT55Q8WUE5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CT55Q8WUE5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.12■■□□□ 1.13
CT55Q8WUE5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CT55Q8WUE5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 MIR3621-201ENST00000580529 85 ntBASIC22.12■■□□□ 1.13
CT55Q8WUE5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.12■■□□□ 1.13
CT55Q8WUE5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CT55Q8WUE5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CT55Q8WUE5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CT55Q8WUE5 AL136116.3-201ENST00000402907 1138 ntBASIC22.11■■□□□ 1.13
CT55Q8WUE5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CT55Q8WUE5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CT55Q8WUE5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.11■■□□□ 1.13
CT55Q8WUE5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CT55Q8WUE5 ERN1-208ENST00000606895 2068 ntBASIC22.1■■□□□ 1.13
CT55Q8WUE5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CT55Q8WUE5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CT55Q8WUE5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.1■■□□□ 1.13
CT55Q8WUE5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.1■■□□□ 1.13
CT55Q8WUE5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms