Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM11BQ8TCY0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 MIR762-201ENST00000390236 83 ntBASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11BQ8TCY0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMIM11BQ8TCY0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 ABCB10P4-201ENST00000566803 2184 ntBASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SMIM11BQ8TCY0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMIM11BQ8TCY0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 MIR6090-201ENST00000622481 60 ntBASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM11BQ8TCY0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMIM11BQ8TCY0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SMIM11BQ8TCY0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 CHML-205ENST00000638160 705 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
SMIM11BQ8TCY0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11BQ8TCY0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11BQ8TCY0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11BQ8TCY0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11BQ8TCY0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms