Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KNL1Q8NG31 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KNL1Q8NG31 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KNL1Q8NG31 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KNL1Q8NG31 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.38■■□□□ 1.33
KNL1Q8NG31 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
KNL1Q8NG31 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.37■■□□□ 1.33
KNL1Q8NG31 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KNL1Q8NG31 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KNL1Q8NG31 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.36■■□□□ 1.33
KNL1Q8NG31 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
KNL1Q8NG31 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.36■■□□□ 1.33
KNL1Q8NG31 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.36■■□□□ 1.33
KNL1Q8NG31 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KNL1Q8NG31 AL356740.2-201ENST00000601559 647 ntBASIC23.36■■□□□ 1.33
KNL1Q8NG31 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KNL1Q8NG31 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.36■■□□□ 1.33
KNL1Q8NG31 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
KNL1Q8NG31 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.35■■□□□ 1.33
KNL1Q8NG31 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
KNL1Q8NG31 AF131216.4-201ENST00000638924 1588 ntBASIC23.35■■□□□ 1.33
KNL1Q8NG31 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KNL1Q8NG31 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KNL1Q8NG31 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.34■■□□□ 1.33
KNL1Q8NG31 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.34■■□□□ 1.33
KNL1Q8NG31 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KNL1Q8NG31 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KNL1Q8NG31 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
KNL1Q8NG31 AC010997.5-201ENST00000609182 354 ntBASIC23.32■■□□□ 1.32
KNL1Q8NG31 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
KNL1Q8NG31 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KNL1Q8NG31 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.32■■□□□ 1.32
KNL1Q8NG31 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
KNL1Q8NG31 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KNL1Q8NG31 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.32■■□□□ 1.32
KNL1Q8NG31 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
KNL1Q8NG31 AC011551.1-201ENST00000614101 683 ntBASIC23.32■■□□□ 1.32
KNL1Q8NG31 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
KNL1Q8NG31 AL117332.1-201ENST00000622628 974 ntBASIC23.32■■□□□ 1.32
KNL1Q8NG31 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
KNL1Q8NG31 ERN1-208ENST00000606895 2068 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KNL1Q8NG31 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.31■■□□□ 1.32
KNL1Q8NG31 AL136116.3-201ENST00000402907 1138 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 SUDS3P1-201ENST00000505831 966 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 AL512631.2-201ENST00000604634 923 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 MIR6724-1-201ENST00000616420 92 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 MIR6724-2-201ENST00000616483 92 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 MIR6724-4-201ENST00000617390 92 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 MIR6724-3-201ENST00000622482 92 ntBASIC23.31■■□□□ 1.32
KNL1Q8NG31 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
KNL1Q8NG31 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KNL1Q8NG31 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KNL1Q8NG31 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.3■■□□□ 1.32
KNL1Q8NG31 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
KNL1Q8NG31 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KNL1Q8NG31 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
KNL1Q8NG31 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.28■■□□□ 1.32
KNL1Q8NG31 AL139246.5-201ENST00000606645 996 ntBASIC23.28■■□□□ 1.32
KNL1Q8NG31 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KNL1Q8NG31 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KNL1Q8NG31 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
KNL1Q8NG31 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
KNL1Q8NG31 AC005837.3-201ENST00000612163 286 ntBASIC23.28■■□□□ 1.32
KNL1Q8NG31 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
KNL1Q8NG31 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KNL1Q8NG31 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.27■■□□□ 1.32
KNL1Q8NG31 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
KNL1Q8NG31 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
KNL1Q8NG31 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
KNL1Q8NG31 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNL1Q8NG31 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
KNL1Q8NG31 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KNL1Q8NG31 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNL1Q8NG31 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.26■■□□□ 1.31
KNL1Q8NG31 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
KNL1Q8NG31 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.26■■□□□ 1.31
KNL1Q8NG31 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.25■■□□□ 1.31
KNL1Q8NG31 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms