Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIML2Q8N7C3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 AC068473.5-201ENST00000616428 2072 ntBASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIML2Q8N7C3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIML2Q8N7C3 AC097639.1-201ENST00000565519 1891 ntBASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIML2Q8N7C3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIML2Q8N7C3 MIR7108-201ENST00000614319 87 ntBASIC22.55■■□□□ 1.2
TRIML2Q8N7C3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRIML2Q8N7C3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIML2Q8N7C3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TRIML2Q8N7C3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIML2Q8N7C3 MIR3960-201ENST00000583311 91 ntBASIC22.54■■□□□ 1.2
TRIML2Q8N7C3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.54■■□□□ 1.2
TRIML2Q8N7C3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TRIML2Q8N7C3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIML2Q8N7C3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 AC138932.3-201ENST00000567634 1902 ntBASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIML2Q8N7C3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 AL157400.5-201ENST00000507624 621 ntBASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 AC060814.1-201ENST00000554326 538 ntBASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIML2Q8N7C3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRIML2Q8N7C3 CLDN5-201ENST00000403084 2357 ntBASIC22.52■■□□□ 1.19
TRIML2Q8N7C3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 AC025884.2-201ENST00000553429 711 ntBASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIML2Q8N7C3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIML2Q8N7C3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIML2Q8N7C3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIML2Q8N7C3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.49■■□□□ 1.19
TRIML2Q8N7C3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIML2Q8N7C3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIML2Q8N7C3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIML2Q8N7C3 SMPD5-203ENST00000639008 1464 ntBASIC22.48■■□□□ 1.19
TRIML2Q8N7C3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms