Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.16■■□□□ 1.46
SYNPOQ8N3V7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.16■■□□□ 1.46
SYNPOQ8N3V7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SYNPOQ8N3V7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SYNPOQ8N3V7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SYNPOQ8N3V7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SYNPOQ8N3V7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.14■■□□□ 1.45
SYNPOQ8N3V7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.14■■□□□ 1.45
SYNPOQ8N3V7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SYNPOQ8N3V7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SYNPOQ8N3V7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SYNPOQ8N3V7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SYNPOQ8N3V7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 AC133561.4-201ENST00000566112 224 ntBASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SYNPOQ8N3V7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 AC110285.6-201ENST00000617652 491 ntBASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SYNPOQ8N3V7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.1■■□□□ 1.45
SYNPOQ8N3V7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 AP004609.3-201ENST00000610705 1884 ntBASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 AC005837.3-201ENST00000612163 286 ntBASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.09■■□□□ 1.45
SYNPOQ8N3V7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SYNPOQ8N3V7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.08■■□□□ 1.45
SYNPOQ8N3V7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.08■■□□□ 1.45
SYNPOQ8N3V7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.08■■□□□ 1.45
SYNPOQ8N3V7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SYNPOQ8N3V7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SYNPOQ8N3V7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 AC096631.2-201ENST00000436136 790 ntBASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 MIR4466-201ENST00000606121 54 ntBASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SYNPOQ8N3V7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SYNPOQ8N3V7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SYNPOQ8N3V7 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.05■■□□□ 1.44
SYNPOQ8N3V7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SYNPOQ8N3V7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SYNPOQ8N3V7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SYNPOQ8N3V7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.04■■□□□ 1.44
SYNPOQ8N3V7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.04■■□□□ 1.44
SYNPOQ8N3V7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SYNPOQ8N3V7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 AL512631.2-201ENST00000604634 923 ntBASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SYNPOQ8N3V7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms