Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00346Q8IVM7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LINC00346Q8IVM7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC00346Q8IVM7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LINC00346Q8IVM7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 LINC01124-201ENST00000409786 2117 ntBASIC20.8■□□□□ 0.92
LINC00346Q8IVM7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00346Q8IVM7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00346Q8IVM7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00346Q8IVM7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00346Q8IVM7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00346Q8IVM7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINC00346Q8IVM7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00346Q8IVM7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC00346Q8IVM7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 AL592293.1-201ENST00000502889 1188 ntBASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC00346Q8IVM7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 RARRES2P2-201ENST00000394842 485 ntBASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 HSD17B1P1-201ENST00000590052 955 ntBASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00346Q8IVM7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00346Q8IVM7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00346Q8IVM7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms