Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.81■■□□□ 1.08
VRK2Q86Y07 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VRK2Q86Y07 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 LINC01124-201ENST00000409786 2117 ntBASIC21.8■■□□□ 1.08
VRK2Q86Y07 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK2Q86Y07 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.79■■□□□ 1.08
VRK2Q86Y07 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
VRK2Q86Y07 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK2Q86Y07 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VRK2Q86Y07 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VRK2Q86Y07 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK2Q86Y07 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK2Q86Y07 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.77■■□□□ 1.08
VRK2Q86Y07 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.76■■□□□ 1.07
VRK2Q86Y07 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK2Q86Y07 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VRK2Q86Y07 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.75■■□□□ 1.07
VRK2Q86Y07 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VRK2Q86Y07 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VRK2Q86Y07 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.73■■□□□ 1.07
VRK2Q86Y07 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.73■■□□□ 1.07
VRK2Q86Y07 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VRK2Q86Y07 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
VRK2Q86Y07 AL592293.1-201ENST00000502889 1188 ntBASIC21.72■■□□□ 1.07
VRK2Q86Y07 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 MIR6089-201ENST00000616698 64 ntBASIC21.72■■□□□ 1.07
VRK2Q86Y07 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VRK2Q86Y07 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.72■■□□□ 1.07
VRK2Q86Y07 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 KRT18P10-201ENST00000388836 1287 ntBASIC21.71■■□□□ 1.07
VRK2Q86Y07 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.71■■□□□ 1.07
VRK2Q86Y07 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VRK2Q86Y07 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.7■■□□□ 1.07
VRK2Q86Y07 FOXO3B-201ENST00000395675 1928 ntBASIC21.7■■□□□ 1.07
VRK2Q86Y07 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VRK2Q86Y07 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
VRK2Q86Y07 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VRK2Q86Y07 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 RARRES2P2-201ENST00000394842 485 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 SPCS2P3-201ENST00000500401 656 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 HSD17B1P1-201ENST00000590052 955 ntBASIC21.69■■□□□ 1.06
VRK2Q86Y07 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.69■■□□□ 1.06
VRK2Q86Y07 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms