Protein–RNA interactions for Protein: Q7RTT5

SSX7, Protein SSX7, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX7Q7RTT5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX7Q7RTT5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX7Q7RTT5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX7Q7RTT5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX7Q7RTT5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 AC004812.2-201ENST00000611079 2094 ntBASIC18.67■□□□□ 0.58
SSX7Q7RTT5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 AL162393.1-201ENST00000437852 946 ntBASIC18.67■□□□□ 0.58
SSX7Q7RTT5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX7Q7RTT5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSX7Q7RTT5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 AC141586.4-201ENST00000624558 1573 ntBASIC18.65■□□□□ 0.58
SSX7Q7RTT5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 MIR3665-201ENST00000578708 105 ntBASIC18.65■□□□□ 0.58
SSX7Q7RTT5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSX7Q7RTT5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.64■□□□□ 0.58
SSX7Q7RTT5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX7Q7RTT5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX7Q7RTT5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
SSX7Q7RTT5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX7Q7RTT5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX7Q7RTT5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX7Q7RTT5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 ABCB10P4-201ENST00000566803 2184 ntBASIC18.62■□□□□ 0.57
SSX7Q7RTT5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX7Q7RTT5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SSX7Q7RTT5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.6■□□□□ 0.57
SSX7Q7RTT5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms