Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 AC087393.1-201ENST00000582896 145 ntBASIC26.31■■□□□ 1.8
LRRC55Q6ZSA7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRRC55Q6ZSA7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC55Q6ZSA7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC55Q6ZSA7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 AC019171.1-201ENST00000601251 1056 ntBASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.28■■□□□ 1.8
LRRC55Q6ZSA7 AC022211.4-201ENST00000625094 2161 ntBASIC26.27■■□□□ 1.8
LRRC55Q6ZSA7 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.27■■□□□ 1.8
LRRC55Q6ZSA7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRRC55Q6ZSA7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LRRC55Q6ZSA7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LRRC55Q6ZSA7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 AC142381.3-201ENST00000568208 1670 ntBASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC55Q6ZSA7 AC097639.1-201ENST00000565519 1891 ntBASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 GUSBP5-201ENST00000418136 578 ntBASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 AL031848.2-201ENST00000607670 837 ntBASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC55Q6ZSA7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LRRC55Q6ZSA7 RPS2P7-201ENST00000447334 885 ntBASIC26.24■■□□□ 1.79
LRRC55Q6ZSA7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
LRRC55Q6ZSA7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 AL592295.1-201ENST00000400984 884 ntBASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRC55Q6ZSA7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 LONRF2P2-201ENST00000439212 571 ntBASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 AC138932.3-201ENST00000567634 1902 ntBASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRC55Q6ZSA7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
LRRC55Q6ZSA7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
LRRC55Q6ZSA7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.21■■□□□ 1.79
LRRC55Q6ZSA7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRC55Q6ZSA7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.21■■□□□ 1.79
LRRC55Q6ZSA7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.79
LRRC55Q6ZSA7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
LRRC55Q6ZSA7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.2■■□□□ 1.79
LRRC55Q6ZSA7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRRC55Q6ZSA7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRRC55Q6ZSA7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.18■■□□□ 1.78
LRRC55Q6ZSA7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC55Q6ZSA7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC55Q6ZSA7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRC55Q6ZSA7 SLC6A10P-202ENST00000431994 2058 ntBASIC26.17■■□□□ 1.78
LRRC55Q6ZSA7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms