Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPL54Q6P161 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRPL54Q6P161 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
MRPL54Q6P161 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 AC141586.4-201ENST00000624558 1573 ntBASIC17.75■□□□□ 0.43
MRPL54Q6P161 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPL54Q6P161 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
MRPL54Q6P161 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL54Q6P161 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL54Q6P161 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MRPL54Q6P161 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPL54Q6P161 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL54Q6P161 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPL54Q6P161 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL54Q6P161 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.74■□□□□ 0.43
MRPL54Q6P161 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL54Q6P161 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MRPL54Q6P161 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.73■□□□□ 0.43
MRPL54Q6P161 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 AL117328.2-201ENST00000624617 1940 ntBASIC17.73■□□□□ 0.43
MRPL54Q6P161 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.73■□□□□ 0.43
MRPL54Q6P161 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL54Q6P161 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MRPL54Q6P161 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPL54Q6P161 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPL54Q6P161 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MRPL54Q6P161 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPL54Q6P161 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPL54Q6P161 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPL54Q6P161 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPL54Q6P161 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MRPL54Q6P161 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPL54Q6P161 AL391121.1-201ENST00000607967 1349 ntBASIC17.72■□□□□ 0.43
MRPL54Q6P161 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.71■□□□□ 0.43
MRPL54Q6P161 SETD8P1-201ENST00000623146 1180 ntBASIC17.71■□□□□ 0.43
MRPL54Q6P161 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.71■□□□□ 0.43
MRPL54Q6P161 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPL54Q6P161 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRPL54Q6P161 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRPL54Q6P161 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.7■□□□□ 0.42
MRPL54Q6P161 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MRPL54Q6P161 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPL54Q6P161 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPL54Q6P161 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPL54Q6P161 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.7■□□□□ 0.42
MRPL54Q6P161 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPL54Q6P161 ABCB10P4-201ENST00000566803 2184 ntBASIC17.7■□□□□ 0.42
MRPL54Q6P161 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPL54Q6P161 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
MRPL54Q6P161 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MRPL54Q6P161 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL54Q6P161 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL54Q6P161 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL54Q6P161 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.69■□□□□ 0.42
MRPL54Q6P161 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.69■□□□□ 0.42
MRPL54Q6P161 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL54Q6P161 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.69■□□□□ 0.42
MRPL54Q6P161 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL54Q6P161 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
MRPL54Q6P161 AC004812.2-201ENST00000611079 2094 ntBASIC17.68■□□□□ 0.42
MRPL54Q6P161 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.68■□□□□ 0.42
MRPL54Q6P161 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPL54Q6P161 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
MRPL54Q6P161 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.68■□□□□ 0.42
MRPL54Q6P161 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MRPL54Q6P161 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPL54Q6P161 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPL54Q6P161 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.67■□□□□ 0.42
MRPL54Q6P161 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL54Q6P161 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 270.8 ms