Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNRNP48Q6IEG0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.21■■□□□ 1.95
SNRNP48Q6IEG0 AC019069.1-201ENST00000610008 1333 ntBASIC27.2■■□□□ 1.95
SNRNP48Q6IEG0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SNRNP48Q6IEG0 FOXO3B-201ENST00000395675 1928 ntBASIC27.2■■□□□ 1.95
SNRNP48Q6IEG0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNRNP48Q6IEG0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNRNP48Q6IEG0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.19■■□□□ 1.94
SNRNP48Q6IEG0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SNRNP48Q6IEG0 ERN1-208ENST00000606895 2068 ntBASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNRNP48Q6IEG0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.16■■□□□ 1.94
SNRNP48Q6IEG0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.15■■□□□ 1.94
SNRNP48Q6IEG0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNRNP48Q6IEG0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.15■■□□□ 1.94
SNRNP48Q6IEG0 AC096887.2-201ENST00000623443 1957 ntBASIC27.15■■□□□ 1.94
SNRNP48Q6IEG0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SNRNP48Q6IEG0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.14■■□□□ 1.94
SNRNP48Q6IEG0 AC010997.5-201ENST00000609182 354 ntBASIC27.14■■□□□ 1.94
SNRNP48Q6IEG0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.14■■□□□ 1.94
SNRNP48Q6IEG0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SNRNP48Q6IEG0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNRNP48Q6IEG0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNRNP48Q6IEG0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNRNP48Q6IEG0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
SNRNP48Q6IEG0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.13■■□□□ 1.93
SNRNP48Q6IEG0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 MTDHP2-201ENST00000601468 714 ntBASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SNRNP48Q6IEG0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNRNP48Q6IEG0 AF131216.4-201ENST00000638924 1588 ntBASIC27.1■■□□□ 1.93
SNRNP48Q6IEG0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.1■■□□□ 1.93
SNRNP48Q6IEG0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.1■■□□□ 1.93
SNRNP48Q6IEG0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNRNP48Q6IEG0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNRNP48Q6IEG0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 AC097639.1-201ENST00000565519 1891 ntBASIC27.08■■□□□ 1.93
SNRNP48Q6IEG0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.08■■□□□ 1.92
SNRNP48Q6IEG0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
SNRNP48Q6IEG0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.07■■□□□ 1.92
SNRNP48Q6IEG0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNRNP48Q6IEG0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.07■■□□□ 1.92
SNRNP48Q6IEG0 AL117332.1-201ENST00000622628 974 ntBASIC27.07■■□□□ 1.92
SNRNP48Q6IEG0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 AC131281.2-201ENST00000520478 145 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 MIR6724-1-201ENST00000616420 92 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 MIR6724-2-201ENST00000616483 92 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 MIR6724-4-201ENST00000617390 92 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 MIR6724-3-201ENST00000622482 92 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.06■■□□□ 1.92
SNRNP48Q6IEG0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms