Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RTL6Q6ICC9 BX664725.1-201ENST00000438252 379 ntBASIC21.27■■□□□ 1
RTL6Q6ICC9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RTL6Q6ICC9 MIR4787-201ENST00000607364 84 ntBASIC21.27■■□□□ 1
RTL6Q6ICC9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RTL6Q6ICC9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.27■■□□□ 1
RTL6Q6ICC9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTL6Q6ICC9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTL6Q6ICC9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 KRT125P-201ENST00000546827 989 ntBASIC21.26■□□□□ 0.99
RTL6Q6ICC9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL6Q6ICC9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 AC137630.3-201ENST00000607245 391 ntBASIC21.25■□□□□ 0.99
RTL6Q6ICC9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL6Q6ICC9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 AC091060.1-201ENST00000623524 1766 ntBASIC21.24■□□□□ 0.99
RTL6Q6ICC9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTL6Q6ICC9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
RTL6Q6ICC9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.22■□□□□ 0.99
RTL6Q6ICC9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.22■□□□□ 0.99
RTL6Q6ICC9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.22■□□□□ 0.99
RTL6Q6ICC9 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.22■□□□□ 0.99
RTL6Q6ICC9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL6Q6ICC9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL6Q6ICC9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL6Q6ICC9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 AC145676.1-201ENST00000514988 2004 ntBASIC21.21■□□□□ 0.99
RTL6Q6ICC9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 UNC93B8-201ENST00000511903 705 ntBASIC21.21■□□□□ 0.99
RTL6Q6ICC9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL6Q6ICC9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL6Q6ICC9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL6Q6ICC9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL6Q6ICC9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL6Q6ICC9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 AC021242.3-201ENST00000607598 1377 ntBASIC21.19■□□□□ 0.98
RTL6Q6ICC9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL6Q6ICC9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.18■□□□□ 0.98
RTL6Q6ICC9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTL6Q6ICC9 MIR4281-201ENST00000580852 62 ntBASIC21.18■□□□□ 0.98
RTL6Q6ICC9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTL6Q6ICC9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL6Q6ICC9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL6Q6ICC9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms