Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 AC027682.1-201ENST00000562846 899 ntBASIC13.35□□□□□ -0.27
UBR4Q5T4S7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBR4Q5T4S7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBR4Q5T4S7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 MIR4651-201ENST00000582622 73 ntBASIC13.33□□□□□ -0.28
UBR4Q5T4S7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 AL355802.2-201ENST00000402069 882 ntBASIC13.33□□□□□ -0.28
UBR4Q5T4S7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 WHAMMP3-201ENST00000611636 1609 ntBASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 SMUG1P1-201ENST00000590640 811 ntBASIC13.32□□□□□ -0.28
UBR4Q5T4S7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 CD99P1-205ENST00000527459 561 ntBASIC13.29□□□□□ -0.28
UBR4Q5T4S7 AL359504.2-201ENST00000605506 1601 ntBASIC13.29□□□□□ -0.28
UBR4Q5T4S7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.27□□□□□ -0.28
UBR4Q5T4S7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 KRT18P6-201ENST00000555540 1265 ntBASIC13.26□□□□□ -0.29
UBR4Q5T4S7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 MIR4767-201ENST00000582827 78 ntBASIC13.26□□□□□ -0.29
UBR4Q5T4S7 CROCCP5-201ENST00000436658 830 ntBASIC13.25□□□□□ -0.29
UBR4Q5T4S7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms