Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCL20P78556 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.61■□□□□ 0.57
CCL20P78556 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL20P78556 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL20P78556 CAHM-201ENST00000604200 896 ntBASIC18.6■□□□□ 0.57
CCL20P78556 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCL20P78556 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL20P78556 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL20P78556 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CCL20P78556 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL20P78556 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.59■□□□□ 0.57
CCL20P78556 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCL20P78556 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL20P78556 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.59■□□□□ 0.57
CCL20P78556 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL20P78556 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL20P78556 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL20P78556 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.58■□□□□ 0.57
CCL20P78556 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCL20P78556 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CCL20P78556 AC233723.2-201ENST00000623798 2106 ntBASIC18.58■□□□□ 0.57
CCL20P78556 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL20P78556 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CCL20P78556 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL20P78556 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.57■□□□□ 0.56
CCL20P78556 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.57■□□□□ 0.56
CCL20P78556 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL20P78556 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.57■□□□□ 0.56
CCL20P78556 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL20P78556 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.56■□□□□ 0.56
CCL20P78556 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL20P78556 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCL20P78556 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL20P78556 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL20P78556 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCL20P78556 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.56■□□□□ 0.56
CCL20P78556 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL20P78556 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL20P78556 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL20P78556 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL20P78556 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.55■□□□□ 0.56
CCL20P78556 RARRES2P7-201ENST00000567349 469 ntBASIC18.55■□□□□ 0.56
CCL20P78556 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCL20P78556 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL20P78556 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL20P78556 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL20P78556 MIR6090-201ENST00000622481 60 ntBASIC18.54■□□□□ 0.56
CCL20P78556 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCL20P78556 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL20P78556 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL20P78556 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL20P78556 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.53■□□□□ 0.56
CCL20P78556 MIR762-201ENST00000390236 83 ntBASIC18.53■□□□□ 0.56
CCL20P78556 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL20P78556 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCL20P78556 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL20P78556 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL20P78556 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL20P78556 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCL20P78556 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.52■□□□□ 0.56
CCL20P78556 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.52■□□□□ 0.56
CCL20P78556 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.52■□□□□ 0.56
CCL20P78556 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCL20P78556 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL20P78556 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL20P78556 AC108673.1-201ENST00000510422 1159 ntBASIC18.52■□□□□ 0.56
CCL20P78556 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.52■□□□□ 0.55
CCL20P78556 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCL20P78556 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCL20P78556 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL20P78556 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.51■□□□□ 0.55
CCL20P78556 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL20P78556 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCL20P78556 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCL20P78556 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL20P78556 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL20P78556 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL20P78556 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.51■□□□□ 0.55
CCL20P78556 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL20P78556 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms