Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LSM6P62312 U85056.1-201ENST00000616429 682 ntBASIC20.73■□□□□ 0.91
LSM6P62312 MIR6089-201ENST00000616698 64 ntBASIC20.73■□□□□ 0.91
LSM6P62312 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM6P62312 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM6P62312 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.73■□□□□ 0.91
LSM6P62312 AL139125.2-201ENST00000623134 1869 ntBASIC20.73■□□□□ 0.91
LSM6P62312 FOXO3B-201ENST00000395675 1928 ntBASIC20.72■□□□□ 0.91
LSM6P62312 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LSM6P62312 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.72■□□□□ 0.91
LSM6P62312 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LSM6P62312 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LSM6P62312 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.72■□□□□ 0.91
LSM6P62312 SPCS2P3-201ENST00000500401 656 ntBASIC20.72■□□□□ 0.91
LSM6P62312 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.72■□□□□ 0.91
LSM6P62312 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LSM6P62312 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM6P62312 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LSM6P62312 MIR6765-201ENST00000614092 87 ntBASIC20.71■□□□□ 0.91
LSM6P62312 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM6P62312 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM6P62312 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM6P62312 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
LSM6P62312 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LSM6P62312 ABHD17AP5-201ENST00000580133 923 ntBASIC20.7■□□□□ 0.9
LSM6P62312 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM6P62312 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.7■□□□□ 0.9
LSM6P62312 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM6P62312 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM6P62312 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM6P62312 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LSM6P62312 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.69■□□□□ 0.9
LSM6P62312 DUX4L9-201ENST00000449051 1259 ntBASIC20.69■□□□□ 0.9
LSM6P62312 AC087393.1-201ENST00000582896 145 ntBASIC20.69■□□□□ 0.9
LSM6P62312 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM6P62312 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
LSM6P62312 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSM6P62312 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.69■□□□□ 0.9
LSM6P62312 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM6P62312 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.68■□□□□ 0.9
LSM6P62312 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM6P62312 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM6P62312 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM6P62312 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.67■□□□□ 0.9
LSM6P62312 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.67■□□□□ 0.9
LSM6P62312 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.67■□□□□ 0.9
LSM6P62312 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.67■□□□□ 0.9
LSM6P62312 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.67■□□□□ 0.9
LSM6P62312 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.67■□□□□ 0.9
LSM6P62312 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM6P62312 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.67■□□□□ 0.9
LSM6P62312 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 KRT18P60-201ENST00000312876 1297 ntBASIC20.66■□□□□ 0.9
LSM6P62312 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 AC129492.7-201ENST00000622992 756 ntBASIC20.66■□□□□ 0.9
LSM6P62312 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.66■□□□□ 0.9
LSM6P62312 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSM6P62312 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LSM6P62312 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
LSM6P62312 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.65■□□□□ 0.9
LSM6P62312 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.65■□□□□ 0.9
LSM6P62312 AC093323.1-202ENST00000635031 2045 ntBASIC20.65■□□□□ 0.9
LSM6P62312 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSM6P62312 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.64■□□□□ 0.9
LSM6P62312 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM6P62312 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM6P62312 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM6P62312 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LSM6P62312 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSM6P62312 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM6P62312 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM6P62312 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSM6P62312 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
LSM6P62312 NTF6A-201ENST00000591175 560 ntBASIC20.64■□□□□ 0.89
LSM6P62312 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM6P62312 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM6P62312 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM6P62312 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM6P62312 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM6P62312 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM6P62312 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.63■□□□□ 0.89
LSM6P62312 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LSM6P62312 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.62■□□□□ 0.89
LSM6P62312 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.62■□□□□ 0.89
LSM6P62312 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM6P62312 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms