Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC61A1P61619 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.44■□□□□ 0.86
SEC61A1P61619 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SEC61A1P61619 AC093536.1-201ENST00000569153 554 ntBASIC20.44■□□□□ 0.86
SEC61A1P61619 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC61A1P61619 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A1P61619 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SEC61A1P61619 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A1P61619 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A1P61619 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A1P61619 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SEC61A1P61619 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A1P61619 RP9P-202ENST00000450133 1212 ntBASIC20.43■□□□□ 0.86
SEC61A1P61619 AL592293.1-201ENST00000502889 1188 ntBASIC20.43■□□□□ 0.86
SEC61A1P61619 AC026202.3-201ENST00000600805 1127 ntBASIC20.43■□□□□ 0.86
SEC61A1P61619 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A1P61619 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SEC61A1P61619 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SEC61A1P61619 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A1P61619 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A1P61619 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
SEC61A1P61619 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SEC61A1P61619 AL033527.3-201ENST00000566366 1196 ntBASIC20.42■□□□□ 0.86
SEC61A1P61619 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A1P61619 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SEC61A1P61619 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A1P61619 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SEC61A1P61619 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.41■□□□□ 0.86
SEC61A1P61619 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.41■□□□□ 0.86
SEC61A1P61619 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A1P61619 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A1P61619 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A1P61619 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.41■□□□□ 0.86
SEC61A1P61619 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SEC61A1P61619 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A1P61619 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.4■□□□□ 0.86
SEC61A1P61619 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 MIR3960-201ENST00000583311 91 ntBASIC20.4■□□□□ 0.86
SEC61A1P61619 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SEC61A1P61619 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEC61A1P61619 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEC61A1P61619 CLDN5-201ENST00000403084 2357 ntBASIC20.39■□□□□ 0.86
SEC61A1P61619 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
SEC61A1P61619 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEC61A1P61619 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEC61A1P61619 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEC61A1P61619 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEC61A1P61619 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.39■□□□□ 0.85
SEC61A1P61619 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEC61A1P61619 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SEC61A1P61619 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.38■□□□□ 0.85
SEC61A1P61619 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
SEC61A1P61619 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 AC004987.1-201ENST00000428627 508 ntBASIC20.38■□□□□ 0.85
SEC61A1P61619 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SEC61A1P61619 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEC61A1P61619 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SEC61A1P61619 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEC61A1P61619 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.37■□□□□ 0.85
SEC61A1P61619 AC129492.7-201ENST00000622992 756 ntBASIC20.37■□□□□ 0.85
SEC61A1P61619 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SEC61A1P61619 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEC61A1P61619 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEC61A1P61619 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.36■□□□□ 0.85
SEC61A1P61619 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SEC61A1P61619 ATP5G2P3-201ENST00000429083 425 ntBASIC20.36■□□□□ 0.85
SEC61A1P61619 RAP2CP1-202ENST00000605179 643 ntBASIC20.36■□□□□ 0.85
SEC61A1P61619 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEC61A1P61619 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEC61A1P61619 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEC61A1P61619 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.35■□□□□ 0.85
SEC61A1P61619 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SEC61A1P61619 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEC61A1P61619 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
SEC61A1P61619 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEC61A1P61619 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEC61A1P61619 TSPY13P-201ENST00000338964 914 ntBASIC20.34■□□□□ 0.85
SEC61A1P61619 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SEC61A1P61619 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SEC61A1P61619 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms