Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.49■■□□□ 1.03
CXCR4P61073 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CXCR4P61073 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.48■■□□□ 1.03
CXCR4P61073 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.48■■□□□ 1.03
CXCR4P61073 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.48■■□□□ 1.03
CXCR4P61073 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CXCR4P61073 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CXCR4P61073 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CXCR4P61073 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXCR4P61073 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXCR4P61073 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CXCR4P61073 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CXCR4P61073 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CXCR4P61073 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXCR4P61073 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.46■■□□□ 1.03
CXCR4P61073 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CXCR4P61073 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CXCR4P61073 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.46■■□□□ 1.03
CXCR4P61073 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXCR4P61073 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CXCR4P61073 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CXCR4P61073 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CXCR4P61073 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
CXCR4P61073 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.45■■□□□ 1.02
CXCR4P61073 AC148477.6-201ENST00000623746 465 ntBASIC21.45■■□□□ 1.02
CXCR4P61073 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.45■■□□□ 1.02
CXCR4P61073 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.44■■□□□ 1.02
CXCR4P61073 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CXCR4P61073 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CXCR4P61073 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CXCR4P61073 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.43■■□□□ 1.02
CXCR4P61073 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CXCR4P61073 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXCR4P61073 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CXCR4P61073 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.43■■□□□ 1.02
CXCR4P61073 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CXCR4P61073 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CXCR4P61073 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.43■■□□□ 1.02
CXCR4P61073 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.43■■□□□ 1.02
CXCR4P61073 AL117328.2-201ENST00000624617 1940 ntBASIC21.43■■□□□ 1.02
CXCR4P61073 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CXCR4P61073 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXCR4P61073 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.43■■□□□ 1.02
CXCR4P61073 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CXCR4P61073 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXCR4P61073 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXCR4P61073 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXCR4P61073 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXCR4P61073 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.42■■□□□ 1.02
CXCR4P61073 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CXCR4P61073 RPS2P35-201ENST00000443417 897 ntBASIC21.42■■□□□ 1.02
CXCR4P61073 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.42■■□□□ 1.02
CXCR4P61073 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CXCR4P61073 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 DUX4L11-201ENST00000611504 1267 ntBASIC21.41■■□□□ 1.02
CXCR4P61073 DUX4L12-201ENST00000614593 1267 ntBASIC21.41■■□□□ 1.02
CXCR4P61073 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 DUX4L14-201ENST00000621227 1267 ntBASIC21.41■■□□□ 1.02
CXCR4P61073 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CXCR4P61073 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
CXCR4P61073 AL359258.2-201ENST00000564063 1566 ntBASIC21.4■■□□□ 1.02
CXCR4P61073 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CXCR4P61073 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.4■■□□□ 1.02
CXCR4P61073 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CXCR4P61073 ABCB10P4-201ENST00000566803 2184 ntBASIC21.4■■□□□ 1.02
CXCR4P61073 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CXCR4P61073 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CXCR4P61073 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CXCR4P61073 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CXCR4P61073 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CXCR4P61073 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
CXCR4P61073 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CXCR4P61073 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CXCR4P61073 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.38■■□□□ 1.01
CXCR4P61073 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 AL359504.2-201ENST00000605506 1601 ntBASIC21.38■■□□□ 1.01
CXCR4P61073 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.38■■□□□ 1.01
CXCR4P61073 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CXCR4P61073 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.38■■□□□ 1.01
CXCR4P61073 C9orf163-202ENST00000624034 2573 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms