Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRRX1P54821 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.33■□□□□ 0.68
PRRX1P54821 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRRX1P54821 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRRX1P54821 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRRX1P54821 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRRX1P54821 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRRX1P54821 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.32■□□□□ 0.68
PRRX1P54821 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRRX1P54821 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRRX1P54821 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRRX1P54821 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRRX1P54821 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.32■□□□□ 0.68
PRRX1P54821 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.31■□□□□ 0.68
PRRX1P54821 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRRX1P54821 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRRX1P54821 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
PRRX1P54821 AC074183.2-201ENST00000623112 922 ntBASIC19.31■□□□□ 0.68
PRRX1P54821 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRRX1P54821 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.31■□□□□ 0.68
PRRX1P54821 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRRX1P54821 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRRX1P54821 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.3■□□□□ 0.68
PRRX1P54821 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRRX1P54821 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.29■□□□□ 0.68
PRRX1P54821 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PRRX1P54821 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRRX1P54821 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
PRRX1P54821 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.28■□□□□ 0.68
PRRX1P54821 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRRX1P54821 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.28■□□□□ 0.68
PRRX1P54821 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.28■□□□□ 0.68
PRRX1P54821 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRRX1P54821 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRRX1P54821 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRRX1P54821 AC020928.2-201ENST00000588717 2197 ntBASIC19.27■□□□□ 0.68
PRRX1P54821 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRRX1P54821 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRRX1P54821 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRRX1P54821 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRRX1P54821 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRRX1P54821 AL033527.3-201ENST00000566366 1196 ntBASIC19.27■□□□□ 0.68
PRRX1P54821 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRRX1P54821 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
PRRX1P54821 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.26■□□□□ 0.67
PRRX1P54821 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRRX1P54821 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 FOXO3B-201ENST00000395675 1928 ntBASIC19.26■□□□□ 0.67
PRRX1P54821 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.26■□□□□ 0.67
PRRX1P54821 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
PRRX1P54821 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.26■□□□□ 0.67
PRRX1P54821 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRRX1P54821 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PRRX1P54821 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 AL592295.1-201ENST00000400984 884 ntBASIC19.25■□□□□ 0.67
PRRX1P54821 LONRF2P2-201ENST00000439212 571 ntBASIC19.25■□□□□ 0.67
PRRX1P54821 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PRRX1P54821 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRRX1P54821 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRRX1P54821 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRRX1P54821 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRRX1P54821 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.24■□□□□ 0.67
PRRX1P54821 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.24■□□□□ 0.67
PRRX1P54821 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 AC019171.1-201ENST00000601251 1056 ntBASIC19.24■□□□□ 0.67
PRRX1P54821 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRRX1P54821 SLC6A10P-202ENST00000431994 2058 ntBASIC19.24■□□□□ 0.67
PRRX1P54821 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRRX1P54821 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRRX1P54821 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms