Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.98■■□□□ 1.27
PDX1P52945 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.98■■□□□ 1.27
PDX1P52945 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDX1P52945 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDX1P52945 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.97■■□□□ 1.27
PDX1P52945 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDX1P52945 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDX1P52945 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDX1P52945 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDX1P52945 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
PDX1P52945 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDX1P52945 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDX1P52945 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.95■■□□□ 1.26
PDX1P52945 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.95■■□□□ 1.26
PDX1P52945 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PDX1P52945 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDX1P52945 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDX1P52945 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDX1P52945 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDX1P52945 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDX1P52945 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDX1P52945 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDX1P52945 TSPY9P-201ENST00000440215 945 ntBASIC22.94■■□□□ 1.26
PDX1P52945 TSPY11P-201ENST00000442607 1045 ntBASIC22.94■■□□□ 1.26
PDX1P52945 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.94■■□□□ 1.26
PDX1P52945 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.94■■□□□ 1.26
PDX1P52945 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDX1P52945 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDX1P52945 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.93■■□□□ 1.26
PDX1P52945 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.93■■□□□ 1.26
PDX1P52945 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.93■■□□□ 1.26
PDX1P52945 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.92■■□□□ 1.26
PDX1P52945 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.92■■□□□ 1.26
PDX1P52945 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.92■■□□□ 1.26
PDX1P52945 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDX1P52945 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDX1P52945 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PDX1P52945 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.92■■□□□ 1.26
PDX1P52945 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDX1P52945 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
PDX1P52945 MIR4281-201ENST00000580852 62 ntBASIC22.91■■□□□ 1.26
PDX1P52945 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.91■■□□□ 1.26
PDX1P52945 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.91■■□□□ 1.26
PDX1P52945 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PDX1P52945 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDX1P52945 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDX1P52945 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDX1P52945 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.9■■□□□ 1.26
PDX1P52945 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.9■■□□□ 1.26
PDX1P52945 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.9■■□□□ 1.26
PDX1P52945 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.9■■□□□ 1.26
PDX1P52945 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDX1P52945 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.9■■□□□ 1.26
PDX1P52945 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDX1P52945 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.89■■□□□ 1.26
PDX1P52945 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDX1P52945 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.89■■□□□ 1.25
PDX1P52945 AC092028.1-203ENST00000608262 953 ntBASIC22.89■■□□□ 1.25
PDX1P52945 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PDX1P52945 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDX1P52945 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDX1P52945 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
PDX1P52945 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDX1P52945 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.88■■□□□ 1.25
PDX1P52945 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.88■■□□□ 1.25
PDX1P52945 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PDX1P52945 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDX1P52945 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PDX1P52945 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.87■■□□□ 1.25
PDX1P52945 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.87■■□□□ 1.25
PDX1P52945 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.87■■□□□ 1.25
PDX1P52945 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDX1P52945 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.86■■□□□ 1.25
PDX1P52945 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
PDX1P52945 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PDX1P52945 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.86■■□□□ 1.25
PDX1P52945 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDX1P52945 AC091060.1-201ENST00000623524 1766 ntBASIC22.86■■□□□ 1.25
PDX1P52945 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDX1P52945 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.85■■□□□ 1.25
PDX1P52945 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.85■■□□□ 1.25
PDX1P52945 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDX1P52945 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDX1P52945 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDX1P52945 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.84■■□□□ 1.25
PDX1P52945 AC131281.2-201ENST00000520478 145 ntBASIC22.84■■□□□ 1.25
PDX1P52945 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.84■■□□□ 1.25
PDX1P52945 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.84■■□□□ 1.25
PDX1P52945 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDX1P52945 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.83■■□□□ 1.25
PDX1P52945 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDX1P52945 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDX1P52945 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDX1P52945 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.82■■□□□ 1.24
PDX1P52945 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDX1P52945 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PDX1P52945 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDX1P52945 MIR638-201ENST00000385237 100 ntBASIC22.82■■□□□ 1.24
PDX1P52945 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDX1P52945 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms