Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 BUD8YLR353W 1812 nt6.78□□□□□ -1.32
RPN11P43588 KIN1YDR122W 3195 nt6.77□□□□□ -1.32
RPN11P43588 DIA3YDL024C 1407 nt6.77□□□□□ -1.33
RPN11P43588 YIL171W-AYIL171W-A 453 nt6.77□□□□□ -1.33
RPN11P43588 YJL220WYJL220W 453 nt6.77□□□□□ -1.33
RPN11P43588 YPK2YMR104C 2034 nt6.77□□□□□ -1.33
RPN11P43588 PKC1YBL105C 3456 nt6.76□□□□□ -1.33
RPN11P43588 YIL060WYIL060W 435 nt6.76□□□□□ -1.33
RPN11P43588 YAP1YML007W 1953 nt6.76□□□□□ -1.33
RPN11P43588 UGO1YDR470C 1509 nt6.76□□□□□ -1.33
RPN11P43588 KSS1YGR040W 1107 nt6.75□□□□□ -1.33
RPN11P43588 VPS29YHR012W 849 nt6.75□□□□□ -1.33
RPN11P43588 YNR048WYNR048W 1182 nt6.75□□□□□ -1.33
RPN11P43588 MAK32YCR019W 1092 nt6.74□□□□□ -1.33
RPN11P43588 RPN12YFR052W 825 nt6.74□□□□□ -1.33
RPN11P43588 MLC2YPR188C 492 nt6.74□□□□□ -1.33
RPN11P43588 FET3YMR058W 1911 nt6.74□□□□□ -1.33
RPN11P43588 CCS1YMR038C 750 nt6.73□□□□□ -1.33
RPN11P43588 ATO2YNR002C 849 nt6.73□□□□□ -1.33
RPN11P43588 IFA38YBR159W 1044 nt6.73□□□□□ -1.33
RPN11P43588 ISC1YER019W 1434 nt6.73□□□□□ -1.33
RPN11P43588 VNX1YNL321W 2727 nt6.73□□□□□ -1.33
RPN11P43588 RPS2YGL123W 765 nt6.72□□□□□ -1.33
RPN11P43588 ATG17YLR423C 1254 nt6.72□□□□□ -1.33
RPN11P43588 MVD1YNR043W 1191 nt6.72□□□□□ -1.33
RPN11P43588 NHP6AYPR052C 282 nt6.72□□□□□ -1.33
RPN11P43588 AFG2YLR397C 2343 nt6.72□□□□□ -1.33
RPN11P43588 MSH1YHR120W 2880 nt6.71□□□□□ -1.34
RPN11P43588 DIT2YDR402C 1470 nt6.71□□□□□ -1.34
RPN11P43588 TAX4YJL083W 1815 nt6.71□□□□□ -1.34
RPN11P43588 TOM20YGR082W 552 nt6.7□□□□□ -1.34
RPN11P43588 SCW4YGR279C 1161 nt6.7□□□□□ -1.34
RPN11P43588 SWP1YMR149W 861 nt6.7□□□□□ -1.34
RPN11P43588 RPN7YPR108W 1290 nt6.7□□□□□ -1.34
RPN11P43588 FRT1YOR324C 1809 nt6.7□□□□□ -1.34
RPN11P43588 PRP31YGR091W 1485 nt6.7□□□□□ -1.34
RPN11P43588 YER186CYER186C 921 nt6.69□□□□□ -1.34
RPN11P43588 PEX22YAL055W 543 nt6.69□□□□□ -1.34
RPN11P43588 YLR122CYLR122C 378 nt6.69□□□□□ -1.34
RPN11P43588 YNL067W-AYNL067W-A 147 nt6.69□□□□□ -1.34
RPN11P43588 SKN1YGR143W 2316 nt6.68□□□□□ -1.34
RPN11P43588 CIR2YOR356W 1896 nt6.68□□□□□ -1.34
RPN11P43588 ARG81YML099C 2643 nt6.68□□□□□ -1.34
RPN11P43588 GWT1YJL091C 1473 nt6.68□□□□□ -1.34
RPN11P43588 ERC1YHR032W 1746 nt6.68□□□□□ -1.34
RPN11P43588 ARN1YHL040C 1884 nt6.68□□□□□ -1.34
RPN11P43588 TAF10YDR167W 621 nt6.67□□□□□ -1.34
RPN11P43588 ARA2YMR041C 1008 nt6.67□□□□□ -1.34
RPN11P43588 CKB2YOR039W 777 nt6.67□□□□□ -1.34
RPN11P43588 SCO2YBR024W 906 nt6.67□□□□□ -1.34
RPN11P43588 ECM10YEL030W 1935 nt6.67□□□□□ -1.34
RPN11P43588 SRF1YDL133W 1314 nt6.67□□□□□ -1.34
RPN11P43588 GEP3YOR205C 1671 nt6.66□□□□□ -1.34
RPN11P43588 ENT5YDR153C 1236 nt6.66□□□□□ -1.34
RPN11P43588 TIF5YPR041W 1218 nt6.66□□□□□ -1.34
RPN11P43588 DRN1YGR093W 1524 nt6.66□□□□□ -1.34
RPN11P43588 SLC1YDL052C 912 nt6.65□□□□□ -1.34
RPN11P43588 MRPL1YDR116C 858 nt6.65□□□□□ -1.34
RPN11P43588 MNN10YDR245W 1182 nt6.65□□□□□ -1.34
RPN11P43588 YOL163WYOL163W 510 nt6.65□□□□□ -1.34
RPN11P43588 UBC4YBR082C 447 nt6.65□□□□□ -1.34
RPN11P43588 MRM2YGL136C 963 nt6.64□□□□□ -1.35
RPN11P43588 MOD5YOR274W 1287 nt6.64□□□□□ -1.35
RPN11P43588 STL1YDR536W 1710 nt6.63□□□□□ -1.35
RPN11P43588 YER148W-AYER148W-A 579 nt6.63□□□□□ -1.35
RPN11P43588 MNN5YJL186W 1761 nt6.63□□□□□ -1.35
RPN11P43588 YML083CYML083C 1257 nt6.63□□□□□ -1.35
RPN11P43588 MRL1YPR079W 1146 nt6.63□□□□□ -1.35
RPN11P43588 YPR195CYPR195C 330 nt6.63□□□□□ -1.35
RPN11P43588 PDB1YBR221C 1101 nt6.63□□□□□ -1.35
RPN11P43588 PPS1YBR276C 2424 nt6.63□□□□□ -1.35
RPN11P43588 TOM5YPR133W-A 153 nt6.62□□□□□ -1.35
RPN11P43588 YJL171CYJL171C 1191 nt6.61□□□□□ -1.35
RPN11P43588 LYS5YGL154C 819 nt6.6□□□□□ -1.35
RPN11P43588 PEP4YPL154C 1218 nt6.6□□□□□ -1.35
RPN11P43588 PPR1YLR014C 2715 nt6.59□□□□□ -1.35
RPN11P43588 SAF1YBR280C 1914 nt6.59□□□□□ -1.35
RPN11P43588 SCS2YER120W 735 nt6.59□□□□□ -1.35
RPN11P43588 SNZ3YFL059W 897 nt6.59□□□□□ -1.35
RPN11P43588 SNZ2YNL333W 897 nt6.59□□□□□ -1.35
RPN11P43588 SMF2YHR050W 1650 nt6.58□□□□□ -1.36
RPN11P43588 TEF1YPR080W 1377 nt6.58□□□□□ -1.36
RPN11P43588 TEF2YBR118W 1377 nt6.58□□□□□ -1.36
RPN11P43588 HSP78YDR258C 2436 nt6.58□□□□□ -1.36
RPN11P43588 UTP7YER082C 1665 nt6.58□□□□□ -1.36
RPN11P43588 YGR068W-AYGR068W-A 96 nt6.57□□□□□ -1.36
RPN11P43588 BGL2YGR282C 942 nt6.57□□□□□ -1.36
RPN11P43588 YNL057WYNL057W 333 nt6.57□□□□□ -1.36
RPN11P43588 CAM1YPL048W 1248 nt6.57□□□□□ -1.36
RPN11P43588 SGV1YPR161C 1974 nt6.57□□□□□ -1.36
RPN11P43588 EHD3YDR036C 1503 nt6.56□□□□□ -1.36
RPN11P43588 RPT2YDL007W 1314 nt6.56□□□□□ -1.36
RPN11P43588 DED81YHR019C 1665 nt6.56□□□□□ -1.36
RPN11P43588 CTF3YLR381W 2202 nt6.56□□□□□ -1.36
RPN11P43588 UBP13YBL067C 2244 nt6.56□□□□□ -1.36
RPN11P43588 ARP3YJR065C 1350 nt6.56□□□□□ -1.36
RPN11P43588 YHR214WYHR214W 612 nt6.55□□□□□ -1.36
RPN11P43588 YJL211CYJL211C 444 nt6.55□□□□□ -1.36
RPN11P43588 APN1YKL114C 1104 nt6.55□□□□□ -1.36
RPN11P43588 YAR066WYAR066W 612 nt6.55□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms