RNA–Protein interactions for RNA: YMR149W

SWP1, Transcript of Delta subunit of the oligosaccharyl transferase glycoprotein complex, yeastyeast

Gene SWP1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP1YMR149W DRS1P32892 752 aaKnown RBP18.4■□□□□ 0.54
SWP1YMR149W MTC1P47018 478 aaKnown RBP17.87■□□□□ 0.45
SWP1YMR149W BFR2Q06631 534 aaKnown RBP16.15■□□□□ 0.18
SWP1YMR149W TFA1P36100 482 aa15.56■□□□□ 0.08
SWP1YMR149W DIP2Q12220 943 aaPredicted RBP15.5■□□□□ 0.07
SWP1YMR149W AVT3P36062 692 aa15.44■□□□□ 0.06
SWP1YMR149W RSE1Q04693 1361 aaKnown RBP14.55□□□□□ -0.08
SWP1YMR149W ISW2Q08773 1120 aa14.47□□□□□ -0.09
SWP1YMR149W RPG1P38249 964 aaKnown RBP14.18□□□□□ -0.14
SWP1YMR149W PRI1P10363 409 aa14.06□□□□□ -0.16
SWP1YMR149W FAP1P53971 965 aa14.06□□□□□ -0.16
SWP1YMR149W RPL17AP05740 184 aaKnown RBP13.92□□□□□ -0.18
SWP1YMR149W RPL17BP46990 184 aaKnown RBP13.92□□□□□ -0.18
SWP1YMR149W RQC2Q12532 1038 aaKnown RBP13.86□□□□□ -0.19
SWP1YMR149W AAD16Q02895 342 aa13.77□□□□□ -0.21
SWP1YMR149W REB1P21538 810 aa13.74□□□□□ -0.21
SWP1YMR149W SPT21P35209 758 aa13.46□□□□□ -0.25
SWP1YMR149W RIM101P33400 625 aa13.39□□□□□ -0.27
SWP1YMR149W TSR3Q12094 313 aaKnown RBP13.32□□□□□ -0.28
SWP1YMR149W PTP3P40048 928 aa13.17□□□□□ -0.3
SWP1YMR149W PRY3P47033 881 aa13.12□□□□□ -0.31
SWP1YMR149W SSP1P38871 571 aa13.02□□□□□ -0.33
SWP1YMR149W OXP1P28273 1286 aa12.94□□□□□ -0.34
SWP1YMR149W DMA1P38823 416 aa12.93□□□□□ -0.34
SWP1YMR149W MRPL32P25348 183 aa12.89□□□□□ -0.35
SWP1YMR149W YKR023WP36119 530 aaKnown RBP12.87□□□□□ -0.35
SWP1YMR149W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.84□□□□□ -0.35not detected
SWP1YMR149W YIL055CP40523 627 aaKnown RBP12.83□□□□□ -0.36
SWP1YMR149W YAH1Q12184 172 aaKnown RBP12.8□□□□□ -0.36
SWP1YMR149W YLR271WQ06152 274 aa12.68□□□□□ -0.38
SWP1YMR149W TFC8Q12308 588 aa12.65□□□□□ -0.38
SWP1YMR149W RSM7P47150 247 aa12.62□□□□□ -0.39
SWP1YMR149W HOP09932 586 aa12.58□□□□□ -0.4
SWP1YMR149W MGA2P40578 1113 aa12.54□□□□□ -0.4
SWP1YMR149W HAA1Q12753 694 aaKnown RBP12.5□□□□□ -0.41
SWP1YMR149W CDC27P38042 758 aa12.47□□□□□ -0.41
SWP1YMR149W DCD1P06773 312 aa12.43□□□□□ -0.42
SWP1YMR149W YCK3P39962 524 aa12.37□□□□□ -0.43
SWP1YMR149W AI2P03876 854 aa12.34□□□□□ -0.43
SWP1YMR149W PSD2P53037 1138 aaKnown RBP12.33□□□□□ -0.44
SWP1YMR149W BBC1P47068 1157 aa12.3□□□□□ -0.44
SWP1YMR149W CST9Q06032 482 aa12.29□□□□□ -0.44
SWP1YMR149W BCH2P36122 765 aa12.27□□□□□ -0.45
SWP1YMR149W SAS10Q12136 610 aaPredicted RBP12.18□□□□□ -0.46
SWP1YMR149W EPS1P40557 701 aa12.13□□□□□ -0.47
SWP1YMR149W LEO1P38439 464 aa12.1□□□□□ -0.47
SWP1YMR149W UBP10P53874 792 aaPredicted RBP12.03□□□□□ -0.48
SWP1YMR149W BDF1P35817 686 aa12.01□□□□□ -0.49
SWP1YMR149W LEU3P08638 886 aa12□□□□□ -0.49
SWP1YMR149W SCY1P53009 804 aa11.99□□□□□ -0.49
SWP1YMR149W MRM1P25270 412 aa11.98□□□□□ -0.49
SWP1YMR149W TAF7Q05021 590 aa11.98□□□□□ -0.49
SWP1YMR149W RAM2P29703 316 aa11.95□□□□□ -0.5
SWP1YMR149W RTG3P38165 486 aa11.9□□□□□ -0.5
SWP1YMR149W MAP2P38174 421 aaKnown RBP11.9□□□□□ -0.5
SWP1YMR149W YGL015CP33199 130 aa11.89□□□□□ -0.51
SWP1YMR149W SET1P38827 1080 aaKnown RBP11.84□□□□□ -0.51
SWP1YMR149W IFH1P39520 1085 aa11.82□□□□□ -0.52
SWP1YMR149W RCR1P38212 213 aa11.81□□□□□ -0.52
SWP1YMR149W MAK11P20484 414 aaKnown RBP11.79□□□□□ -0.52
SWP1YMR149W SLX5P32828 619 aaKnown RBP11.79□□□□□ -0.52
SWP1YMR149W YPR148CQ06523 435 aa11.77□□□□□ -0.53
SWP1YMR149W CKB1P43639 278 aa11.76□□□□□ -0.53
SWP1YMR149W VPS29P38759 282 aa11.68□□□□□ -0.54
SWP1YMR149W VPS70P47161 811 aa11.66□□□□□ -0.54
SWP1YMR149W RPN1P38764 993 aaKnown RBP11.63□□□□□ -0.55
SWP1YMR149W NOP53Q12080 455 aaKnown RBP11.63□□□□□ -0.55
SWP1YMR149W YMR1P47147 688 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
SWP1YMR149W SPB4P25808 606 aaPredicted RBP11.61□□□□□ -0.55
SWP1YMR149W COQ8P27697 501 aa11.59□□□□□ -0.55
SWP1YMR149W TIF4632P39936 914 aaKnown RBP11.53□□□□□ -0.56
SWP1YMR149W NSR1P27476 414 aaKnown RBP RIP-Chip data11.51□□□□□ -0.57not detected
SWP1YMR149W STS1P38637 319 aa11.49□□□□□ -0.57
SWP1YMR149W DBP1P24784 617 aaKnown RBP11.47□□□□□ -0.57
SWP1YMR149W DSF2P38213 736 aa11.47□□□□□ -0.57
SWP1YMR149W YOR238WQ08634 303 aa11.47□□□□□ -0.57
SWP1YMR149W MIF2P35201 549 aa11.46□□□□□ -0.57
SWP1YMR149W PBS2P08018 668 aa11.43□□□□□ -0.58
SWP1YMR149W TGL3P40308 642 aa11.42□□□□□ -0.58
SWP1YMR149W EDS1P38073 919 aa11.41□□□□□ -0.58
SWP1YMR149W YFR006WP43590 535 aa11.41□□□□□ -0.58
SWP1YMR149W YAP5P40574 245 aa11.4□□□□□ -0.58
SWP1YMR149W REF2P42073 533 aaPredicted RBP11.37□□□□□ -0.59
SWP1YMR149W PTC3P34221 468 aaKnown RBP11.34□□□□□ -0.59
SWP1YMR149W YNR021WP53723 404 aaKnown RBP11.32□□□□□ -0.6
SWP1YMR149W MAK21Q12176 1025 aaKnown RBP11.32□□□□□ -0.6
SWP1YMR149W MAM3Q12296 706 aa11.32□□□□□ -0.6
SWP1YMR149W VMA1P17255 1071 aaKnown RBP11.26□□□□□ -0.61
SWP1YMR149W PIB1Q06651 286 aa11.22□□□□□ -0.61
SWP1YMR149W IES2P40154 320 aa11.21□□□□□ -0.61
SWP1YMR149W DMA2P53924 522 aa11.21□□□□□ -0.61
SWP1YMR149W COX6P00427 148 aa11.2□□□□□ -0.62
SWP1YMR149W AIM7Q12156 149 aa11.2□□□□□ -0.62
SWP1YMR149W GRE2Q12068 342 aaKnown RBP11.19□□□□□ -0.62
SWP1YMR149W ATH1P48016 1211 aa11.18□□□□□ -0.62
SWP1YMR149W GUT1P32190 709 aa11.17□□□□□ -0.62
SWP1YMR149W SAM3Q08986 587 aa11.17□□□□□ -0.62
SWP1YMR149W KIN1P13185 1064 aa11.16□□□□□ -0.62
SWP1YMR149W NUP42P49686 430 aaKnown RBP11.15□□□□□ -0.62
SWP1YMR149W MST1P07236 462 aa11.13□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms