Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD74P04233 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.84■□□□□ 0.77
CD74P04233 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CD74P04233 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.84■□□□□ 0.77
CD74P04233 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.84■□□□□ 0.77
CD74P04233 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.84■□□□□ 0.77
CD74P04233 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD74P04233 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD74P04233 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.83■□□□□ 0.77
CD74P04233 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD74P04233 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CD74P04233 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD74P04233 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD74P04233 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD74P04233 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD74P04233 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CD74P04233 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.82■□□□□ 0.76
CD74P04233 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD74P04233 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD74P04233 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CD74P04233 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD74P04233 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CD74P04233 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD74P04233 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.81■□□□□ 0.76
CD74P04233 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.81■□□□□ 0.76
CD74P04233 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD74P04233 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CD74P04233 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD74P04233 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.8■□□□□ 0.76
CD74P04233 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CD74P04233 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.8■□□□□ 0.76
CD74P04233 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CD74P04233 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CD74P04233 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD74P04233 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD74P04233 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD74P04233 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CD74P04233 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
CD74P04233 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD74P04233 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD74P04233 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD74P04233 DUX4L29-201ENST00000425409 679 ntBASIC19.79■□□□□ 0.76
CD74P04233 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.79■□□□□ 0.76
CD74P04233 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD74P04233 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD74P04233 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD74P04233 C9orf163-202ENST00000624034 2573 ntBASIC19.78■□□□□ 0.76
CD74P04233 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD74P04233 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CD74P04233 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD74P04233 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD74P04233 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CD74P04233 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD74P04233 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD74P04233 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.77■□□□□ 0.76
CD74P04233 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CD74P04233 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CD74P04233 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD74P04233 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CD74P04233 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD74P04233 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD74P04233 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CD74P04233 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD74P04233 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.75■□□□□ 0.75
CD74P04233 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD74P04233 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.75■□□□□ 0.75
CD74P04233 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD74P04233 AL117328.2-201ENST00000624617 1940 ntBASIC19.74■□□□□ 0.75
CD74P04233 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.74■□□□□ 0.75
CD74P04233 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CD74P04233 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD74P04233 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.74■□□□□ 0.75
CD74P04233 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.73■□□□□ 0.75
CD74P04233 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD74P04233 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.73■□□□□ 0.75
CD74P04233 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms