Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.01■■□□□ 1.11
PDGFAP04085 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.01■■□□□ 1.11
PDGFAP04085 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFAP04085 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.01■■□□□ 1.11
PDGFAP04085 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 AL139246.5-201ENST00000606645 996 ntBASIC22.01■■□□□ 1.11
PDGFAP04085 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFAP04085 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFAP04085 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFAP04085 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFAP04085 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFAP04085 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDGFAP04085 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDGFAP04085 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22■■□□□ 1.11
PDGFAP04085 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.99■■□□□ 1.11
PDGFAP04085 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFAP04085 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PDGFAP04085 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.99■■□□□ 1.11
PDGFAP04085 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.99■■□□□ 1.11
PDGFAP04085 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFAP04085 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.99■■□□□ 1.11
PDGFAP04085 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
PDGFAP04085 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFAP04085 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PDGFAP04085 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.98■■□□□ 1.11
PDGFAP04085 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.98■■□□□ 1.11
PDGFAP04085 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFAP04085 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFAP04085 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PDGFAP04085 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFAP04085 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFAP04085 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFAP04085 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.97■■□□□ 1.11
PDGFAP04085 LINC01003-201ENST00000564834 1764 ntBASIC21.97■■□□□ 1.11
PDGFAP04085 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFAP04085 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFAP04085 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.97■■□□□ 1.11
PDGFAP04085 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PDGFAP04085 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PDGFAP04085 MIR4281-201ENST00000580852 62 ntBASIC21.97■■□□□ 1.11
PDGFAP04085 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDGFAP04085 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFAP04085 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDGFAP04085 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDGFAP04085 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
PDGFAP04085 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.96■■□□□ 1.11
PDGFAP04085 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.96■■□□□ 1.11
PDGFAP04085 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDGFAP04085 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFAP04085 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFAP04085 AL136116.3-201ENST00000402907 1138 ntBASIC21.95■■□□□ 1.1
PDGFAP04085 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDGFAP04085 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFAP04085 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFAP04085 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFAP04085 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PDGFAP04085 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFAP04085 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFAP04085 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFAP04085 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PDGFAP04085 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PDGFAP04085 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFAP04085 AL117332.1-201ENST00000622628 974 ntBASIC21.94■■□□□ 1.1
PDGFAP04085 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.94■■□□□ 1.1
PDGFAP04085 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDGFAP04085 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDGFAP04085 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDGFAP04085 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
PDGFAP04085 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDGFAP04085 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFAP04085 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFAP04085 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.92■■□□□ 1.1
PDGFAP04085 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PDGFAP04085 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFAP04085 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFAP04085 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.91■■□□□ 1.1
PDGFAP04085 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.91■■□□□ 1.1
PDGFAP04085 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.91■■□□□ 1.1
PDGFAP04085 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.91■■□□□ 1.1
PDGFAP04085 AC010997.5-201ENST00000609182 354 ntBASIC21.91■■□□□ 1.1
PDGFAP04085 AC110285.6-201ENST00000617652 491 ntBASIC21.91■■□□□ 1.1
PDGFAP04085 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFAP04085 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
PDGFAP04085 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PDGFAP04085 AC142472.1-201ENST00000612013 1741 ntBASIC21.9■■□□□ 1.1
PDGFAP04085 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
PDGFAP04085 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.9■■□□□ 1.1
PDGFAP04085 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.9■■□□□ 1.1
PDGFAP04085 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFAP04085 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFAP04085 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFAP04085 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms