Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.49■■□□□ 1.99
ALDH1A1P00352 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
ALDH1A1P00352 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ALDH1A1P00352 SRD5A1P1-201ENST00000442297 786 ntBASIC27.48■■□□□ 1.99
ALDH1A1P00352 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.48■■□□□ 1.99
ALDH1A1P00352 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
ALDH1A1P00352 MIR6722-201ENST00000617286 78 ntBASIC27.48■■□□□ 1.99
ALDH1A1P00352 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ALDH1A1P00352 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.47■■□□□ 1.99
ALDH1A1P00352 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.47■■□□□ 1.99
ALDH1A1P00352 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.47■■□□□ 1.99
ALDH1A1P00352 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
ALDH1A1P00352 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ALDH1A1P00352 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.47■■□□□ 1.99
ALDH1A1P00352 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ALDH1A1P00352 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
ALDH1A1P00352 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
ALDH1A1P00352 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
ALDH1A1P00352 AC097381.1-201ENST00000429019 1296 ntBASIC27.45■■□□□ 1.98
ALDH1A1P00352 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.45■■□□□ 1.98
ALDH1A1P00352 AL136967.2-201ENST00000623968 743 ntBASIC27.45■■□□□ 1.98
ALDH1A1P00352 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
ALDH1A1P00352 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
ALDH1A1P00352 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
ALDH1A1P00352 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ALDH1A1P00352 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.43■■□□□ 1.98
ALDH1A1P00352 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
ALDH1A1P00352 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
ALDH1A1P00352 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
ALDH1A1P00352 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ALDH1A1P00352 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ALDH1A1P00352 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.42■■□□□ 1.98
ALDH1A1P00352 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.42■■□□□ 1.98
ALDH1A1P00352 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.42■■□□□ 1.98
ALDH1A1P00352 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ALDH1A1P00352 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.42■■□□□ 1.98
ALDH1A1P00352 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.41■■□□□ 1.98
ALDH1A1P00352 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
ALDH1A1P00352 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ALDH1A1P00352 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
ALDH1A1P00352 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ALDH1A1P00352 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.4■■□□□ 1.98
ALDH1A1P00352 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.4■■□□□ 1.98
ALDH1A1P00352 AF213884.3-201ENST00000563833 479 ntBASIC27.4■■□□□ 1.98
ALDH1A1P00352 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.4■■□□□ 1.98
ALDH1A1P00352 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ALDH1A1P00352 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
ALDH1A1P00352 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
ALDH1A1P00352 SNX5-217ENST00000606557 1087 ntBASIC27.39■■□□□ 1.98
ALDH1A1P00352 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ALDH1A1P00352 MIR939-201ENST00000401314 82 ntBASIC27.38■■□□□ 1.97
ALDH1A1P00352 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.38■■□□□ 1.97
ALDH1A1P00352 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ALDH1A1P00352 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ALDH1A1P00352 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.37■■□□□ 1.97
ALDH1A1P00352 DUX4L19-201ENST00000557448 1267 ntBASIC27.37■■□□□ 1.97
ALDH1A1P00352 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.36■■□□□ 1.97
ALDH1A1P00352 AL162430.1-201ENST00000480705 870 ntBASIC27.36■■□□□ 1.97
ALDH1A1P00352 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ALDH1A1P00352 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ALDH1A1P00352 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.36■■□□□ 1.97
ALDH1A1P00352 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ALDH1A1P00352 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
ALDH1A1P00352 AC004448.1-201ENST00000458332 883 ntBASIC27.35■■□□□ 1.97
ALDH1A1P00352 AC091305.1-201ENST00000479476 895 ntBASIC27.35■■□□□ 1.97
ALDH1A1P00352 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ALDH1A1P00352 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ALDH1A1P00352 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ALDH1A1P00352 AC142472.1-201ENST00000612013 1741 ntBASIC27.34■■□□□ 1.97
ALDH1A1P00352 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.34■■□□□ 1.97
ALDH1A1P00352 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.34■■□□□ 1.97
ALDH1A1P00352 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ALDH1A1P00352 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ALDH1A1P00352 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ALDH1A1P00352 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.33■■□□□ 1.97
ALDH1A1P00352 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.33■■□□□ 1.97
ALDH1A1P00352 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.33■■□□□ 1.97
ALDH1A1P00352 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
ALDH1A1P00352 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ALDH1A1P00352 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ALDH1A1P00352 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ALDH1A1P00352 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ALDH1A1P00352 AP001330.3-201ENST00000520123 633 ntBASIC27.32■■□□□ 1.96
ALDH1A1P00352 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.32■■□□□ 1.96
ALDH1A1P00352 AC087623.3-201ENST00000607047 1098 ntBASIC27.32■■□□□ 1.96
ALDH1A1P00352 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.32■■□□□ 1.96
ALDH1A1P00352 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ALDH1A1P00352 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ALDH1A1P00352 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.31■■□□□ 1.96
ALDH1A1P00352 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ALDH1A1P00352 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ALDH1A1P00352 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.31■■□□□ 1.96
ALDH1A1P00352 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ALDH1A1P00352 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
ALDH1A1P00352 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
ALDH1A1P00352 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ALDH1A1P00352 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ALDH1A1P00352 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ALDH1A1P00352 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ALDH1A1P00352 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms