Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK3AO75631 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
UPK3AO75631 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK3AO75631 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK3AO75631 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.12■□□□□ 0.97
UPK3AO75631 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.12■□□□□ 0.97
UPK3AO75631 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.12■□□□□ 0.97
UPK3AO75631 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPK3AO75631 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK3AO75631 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
UPK3AO75631 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPK3AO75631 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK3AO75631 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK3AO75631 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK3AO75631 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
UPK3AO75631 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK3AO75631 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK3AO75631 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.1■□□□□ 0.97
UPK3AO75631 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
UPK3AO75631 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK3AO75631 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK3AO75631 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK3AO75631 AC097639.1-201ENST00000565519 1891 ntBASIC21.09■□□□□ 0.97
UPK3AO75631 TSPY13P-201ENST00000338964 914 ntBASIC21.09■□□□□ 0.97
UPK3AO75631 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK3AO75631 KRT18P10-201ENST00000388836 1287 ntBASIC21.09■□□□□ 0.97
UPK3AO75631 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.09■□□□□ 0.97
UPK3AO75631 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK3AO75631 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
UPK3AO75631 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UPK3AO75631 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UPK3AO75631 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.09■□□□□ 0.97
UPK3AO75631 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UPK3AO75631 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPK3AO75631 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPK3AO75631 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.08■□□□□ 0.97
UPK3AO75631 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UPK3AO75631 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UPK3AO75631 AL033527.3-201ENST00000566366 1196 ntBASIC21.08■□□□□ 0.97
UPK3AO75631 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPK3AO75631 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPK3AO75631 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 RPS2P7-201ENST00000447334 885 ntBASIC21.07■□□□□ 0.96
UPK3AO75631 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.07■□□□□ 0.96
UPK3AO75631 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.07■□□□□ 0.96
UPK3AO75631 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK3AO75631 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPK3AO75631 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK3AO75631 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK3AO75631 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK3AO75631 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
UPK3AO75631 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK3AO75631 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK3AO75631 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
UPK3AO75631 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK3AO75631 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK3AO75631 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK3AO75631 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.04■□□□□ 0.96
UPK3AO75631 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 AC087393.1-201ENST00000582896 145 ntBASIC21.04■□□□□ 0.96
UPK3AO75631 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.04■□□□□ 0.96
UPK3AO75631 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPK3AO75631 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.03■□□□□ 0.96
UPK3AO75631 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK3AO75631 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK3AO75631 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK3AO75631 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK3AO75631 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPK3AO75631 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPK3AO75631 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.01■□□□□ 0.95
UPK3AO75631 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK3AO75631 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK3AO75631 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 SLC6A10P-202ENST00000431994 2058 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms