Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
OPHN1O60890 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
OPHN1O60890 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
OPHN1O60890 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
OPHN1O60890 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.48■■□□□ 1.51
OPHN1O60890 RAP2CP1-202ENST00000605179 643 ntBASIC24.48■■□□□ 1.51
OPHN1O60890 MIR6765-201ENST00000614092 87 ntBASIC24.48■■□□□ 1.51
OPHN1O60890 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
OPHN1O60890 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
OPHN1O60890 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
OPHN1O60890 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.47■■□□□ 1.51
OPHN1O60890 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
OPHN1O60890 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
OPHN1O60890 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
OPHN1O60890 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.47■■□□□ 1.51
OPHN1O60890 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
OPHN1O60890 SPCS2P3-201ENST00000500401 656 ntBASIC24.47■■□□□ 1.51
OPHN1O60890 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
OPHN1O60890 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
OPHN1O60890 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.46■■□□□ 1.51
OPHN1O60890 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
OPHN1O60890 AC097639.1-201ENST00000565519 1891 ntBASIC24.45■■□□□ 1.51
OPHN1O60890 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.45■■□□□ 1.5
OPHN1O60890 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
OPHN1O60890 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.45■■□□□ 1.5
OPHN1O60890 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
OPHN1O60890 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
OPHN1O60890 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
OPHN1O60890 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
OPHN1O60890 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
OPHN1O60890 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
OPHN1O60890 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
OPHN1O60890 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
OPHN1O60890 AC142381.3-201ENST00000568208 1670 ntBASIC24.43■■□□□ 1.5
OPHN1O60890 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
OPHN1O60890 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
OPHN1O60890 AC018755.3-202ENST00000596210 929 ntBASIC24.43■■□□□ 1.5
OPHN1O60890 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.43■■□□□ 1.5
OPHN1O60890 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.43■■□□□ 1.5
OPHN1O60890 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
OPHN1O60890 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
OPHN1O60890 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.42■■□□□ 1.5
OPHN1O60890 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
OPHN1O60890 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
OPHN1O60890 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
OPHN1O60890 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.41■■□□□ 1.5
OPHN1O60890 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.41■■□□□ 1.5
OPHN1O60890 AC103834.1-201ENST00000520383 144 ntBASIC24.41■■□□□ 1.5
OPHN1O60890 THA1P-201ENST00000590384 1145 ntBASIC24.41■■□□□ 1.5
OPHN1O60890 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.41■■□□□ 1.5
OPHN1O60890 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.41■■□□□ 1.5
OPHN1O60890 AC022211.4-201ENST00000625094 2161 ntBASIC24.41■■□□□ 1.5
OPHN1O60890 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
OPHN1O60890 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
OPHN1O60890 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
OPHN1O60890 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
OPHN1O60890 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
OPHN1O60890 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.4■■□□□ 1.5
OPHN1O60890 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
OPHN1O60890 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
OPHN1O60890 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
OPHN1O60890 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
OPHN1O60890 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
OPHN1O60890 GUSBP5-201ENST00000418136 578 ntBASIC24.39■■□□□ 1.49
OPHN1O60890 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
OPHN1O60890 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
OPHN1O60890 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.38■■□□□ 1.49
OPHN1O60890 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.38■■□□□ 1.49
OPHN1O60890 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
OPHN1O60890 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.37■■□□□ 1.49
OPHN1O60890 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.37■■□□□ 1.49
OPHN1O60890 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
OPHN1O60890 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
OPHN1O60890 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
OPHN1O60890 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.36■■□□□ 1.49
OPHN1O60890 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
OPHN1O60890 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
OPHN1O60890 PVT1_1.1-201ENST00000615125 194 ntBASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms