Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.69■■□□□ 1.86
MSH4O15457 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.69■■□□□ 1.86
MSH4O15457 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.69■■□□□ 1.86
MSH4O15457 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
MSH4O15457 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
MSH4O15457 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.68■■□□□ 1.86
MSH4O15457 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.68■■□□□ 1.86
MSH4O15457 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.68■■□□□ 1.86
MSH4O15457 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
MSH4O15457 SLC6A10P-202ENST00000431994 2058 ntBASIC26.67■■□□□ 1.86
MSH4O15457 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MSH4O15457 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MSH4O15457 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.66■■□□□ 1.86
MSH4O15457 AL031848.2-201ENST00000607670 837 ntBASIC26.66■■□□□ 1.86
MSH4O15457 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MSH4O15457 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MSH4O15457 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MSH4O15457 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.65■■□□□ 1.86
MSH4O15457 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
MSH4O15457 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH4O15457 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH4O15457 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
MSH4O15457 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.64■■□□□ 1.86
MSH4O15457 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MSH4O15457 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MSH4O15457 KRT18P24-201ENST00000344739 1156 ntBASIC26.64■■□□□ 1.86
MSH4O15457 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.64■■□□□ 1.86
MSH4O15457 AC120024.1-201ENST00000562672 995 ntBASIC26.64■■□□□ 1.86
MSH4O15457 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.63■■□□□ 1.85
MSH4O15457 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MSH4O15457 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
MSH4O15457 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
MSH4O15457 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
MSH4O15457 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MSH4O15457 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.62■■□□□ 1.85
MSH4O15457 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH4O15457 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.62■■□□□ 1.85
MSH4O15457 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH4O15457 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH4O15457 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.61■■□□□ 1.85
MSH4O15457 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH4O15457 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MSH4O15457 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH4O15457 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH4O15457 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.61■■□□□ 1.85
MSH4O15457 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MSH4O15457 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH4O15457 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH4O15457 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
MSH4O15457 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.6■■□□□ 1.85
MSH4O15457 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
MSH4O15457 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MSH4O15457 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MSH4O15457 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.59■■□□□ 1.85
MSH4O15457 THA1P-201ENST00000590384 1145 ntBASIC26.59■■□□□ 1.85
MSH4O15457 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MSH4O15457 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MSH4O15457 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.59■■□□□ 1.85
MSH4O15457 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
MSH4O15457 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 AC009299.2-201ENST00000482477 511 ntBASIC26.58■■□□□ 1.85
MSH4O15457 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MSH4O15457 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
MSH4O15457 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
MSH4O15457 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
MSH4O15457 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
MSH4O15457 AL035685.1-201ENST00000636663 812 ntBASIC26.57■■□□□ 1.84
MSH4O15457 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
MSH4O15457 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
MSH4O15457 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.56■■□□□ 1.84
MSH4O15457 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
MSH4O15457 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MSH4O15457 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.56■■□□□ 1.84
MSH4O15457 AC011551.1-201ENST00000614101 683 ntBASIC26.56■■□□□ 1.84
MSH4O15457 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
MSH4O15457 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
MSH4O15457 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MSH4O15457 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.56■■□□□ 1.84
MSH4O15457 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
MSH4O15457 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MSH4O15457 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.55■■□□□ 1.84
MSH4O15457 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MSH4O15457 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
MSH4O15457 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
MSH4O15457 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MSH4O15457 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.55■■□□□ 1.84
MSH4O15457 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
MSH4O15457 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MSH4O15457 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms