Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF11O14788 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFSF11O14788 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF11O14788 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TNFSF11O14788 AL592295.1-201ENST00000400984 884 ntBASIC21.23■□□□□ 0.99
TNFSF11O14788 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.23■□□□□ 0.99
TNFSF11O14788 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF11O14788 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF11O14788 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFSF11O14788 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFSF11O14788 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF11O14788 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFSF11O14788 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF11O14788 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFSF11O14788 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFSF11O14788 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFSF11O14788 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TNFSF11O14788 AC022616.5-201ENST00000518796 181 ntBASIC21.21■□□□□ 0.99
TNFSF11O14788 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFSF11O14788 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFSF11O14788 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
TNFSF11O14788 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
TNFSF11O14788 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFSF11O14788 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 AC103724.3-201ENST00000564481 992 ntBASIC21.19■□□□□ 0.98
TNFSF11O14788 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.19■□□□□ 0.98
TNFSF11O14788 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFSF11O14788 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFSF11O14788 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF11O14788 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNFSF11O14788 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
TNFSF11O14788 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF11O14788 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF11O14788 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNFSF11O14788 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFSF11O14788 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF11O14788 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF11O14788 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFSF11O14788 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFSF11O14788 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TNFSF11O14788 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF11O14788 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFSF11O14788 SLC6A10P-202ENST00000431994 2058 ntBASIC21.17■□□□□ 0.98
TNFSF11O14788 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFSF11O14788 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF11O14788 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF11O14788 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF11O14788 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF11O14788 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
TNFSF11O14788 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFSF11O14788 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
TNFSF11O14788 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.16■□□□□ 0.98
TNFSF11O14788 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFSF11O14788 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TNFSF11O14788 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF11O14788 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF11O14788 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF11O14788 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFSF11O14788 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.15■□□□□ 0.98
TNFSF11O14788 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF11O14788 AL031848.2-201ENST00000607670 837 ntBASIC21.15■□□□□ 0.98
TNFSF11O14788 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFSF11O14788 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFSF11O14788 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFSF11O14788 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.14■□□□□ 0.98
TNFSF11O14788 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TNFSF11O14788 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFSF11O14788 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TNFSF11O14788 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF11O14788 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TNFSF11O14788 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TNFSF11O14788 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF11O14788 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF11O14788 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF11O14788 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFSF11O14788 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TNFSF11O14788 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFSF11O14788 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF11O14788 AC120024.1-201ENST00000562672 995 ntBASIC21.12■□□□□ 0.97
TNFSF11O14788 THA1P-201ENST00000590384 1145 ntBASIC21.12■□□□□ 0.97
TNFSF11O14788 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFSF11O14788 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF11O14788 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF11O14788 AL451085.2-201ENST00000605085 799 ntBASIC21.11■□□□□ 0.97
TNFSF11O14788 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFSF11O14788 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFSF11O14788 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms