Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CHD2O14647 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CHD2O14647 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC33.61■■■□□ 2.97
CHD2O14647 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
CHD2O14647 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CHD2O14647 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CHD2O14647 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC33.6■■■□□ 2.97
CHD2O14647 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC33.6■■■□□ 2.97
CHD2O14647 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
CHD2O14647 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
CHD2O14647 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
CHD2O14647 UNC93B3-201ENST00000308076 687 ntBASIC33.58■■■□□ 2.97
CHD2O14647 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CHD2O14647 LINC01003-201ENST00000564834 1764 ntBASIC33.58■■■□□ 2.97
CHD2O14647 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHD2O14647 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC33.58■■■□□ 2.97
CHD2O14647 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHD2O14647 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHD2O14647 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC33.57■■■□□ 2.96
CHD2O14647 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD2O14647 DRD5P2-201ENST00000421395 2012 ntBASIC33.56■■■□□ 2.96
CHD2O14647 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD2O14647 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC33.56■■■□□ 2.96
CHD2O14647 AL136162.1-201ENST00000607711 1078 ntBASIC33.56■■■□□ 2.96
CHD2O14647 AC105265.2-201ENST00000467189 838 ntBASIC33.55■■■□□ 2.96
CHD2O14647 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
CHD2O14647 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
CHD2O14647 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
CHD2O14647 EDA-201ENST00000338901 1233 ntBASIC33.54■■■□□ 2.96
CHD2O14647 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHD2O14647 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC33.54■■■□□ 2.96
CHD2O14647 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC33.53■■■□□ 2.96
CHD2O14647 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC33.53■■■□□ 2.96
CHD2O14647 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC33.53■■■□□ 2.96
CHD2O14647 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CHD2O14647 AC024257.2-201ENST00000549699 147 ntBASIC33.53■■■□□ 2.96
CHD2O14647 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC33.51■■■□□ 2.96
CHD2O14647 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
CHD2O14647 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHD2O14647 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC33.51■■■□□ 2.95
CHD2O14647 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHD2O14647 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHD2O14647 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CHD2O14647 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC33.51■■■□□ 2.95
CHD2O14647 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHD2O14647 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CHD2O14647 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD2O14647 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC33.5■■■□□ 2.95
CHD2O14647 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD2O14647 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD2O14647 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC33.49■■■□□ 2.95
CHD2O14647 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD2O14647 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD2O14647 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD2O14647 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC33.49■■■□□ 2.95
CHD2O14647 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33.48■■■□□ 2.95
CHD2O14647 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CHD2O14647 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
CHD2O14647 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
CHD2O14647 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD2O14647 SSSCA1-AS1-201ENST00000567594 614 ntBASIC33.46■■■□□ 2.95
CHD2O14647 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD2O14647 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD2O14647 ABCB10P1-201ENST00000614297 2181 ntBASIC33.46■■■□□ 2.95
CHD2O14647 SNAI3-AS1-204ENST00000567997 2048 ntBASIC33.45■■■□□ 2.95
CHD2O14647 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC33.45■■■□□ 2.95
CHD2O14647 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC33.44■■■□□ 2.94
CHD2O14647 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CHD2O14647 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC33.44■■■□□ 2.94
CHD2O14647 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHD2O14647 AP001330.3-201ENST00000520123 633 ntBASIC33.43■■■□□ 2.94
CHD2O14647 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CHD2O14647 MIR939-201ENST00000401314 82 ntBASIC33.42■■■□□ 2.94
CHD2O14647 MIR6821-201ENST00000617625 74 ntBASIC33.42■■■□□ 2.94
CHD2O14647 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC33.42■■■□□ 2.94
CHD2O14647 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD2O14647 AF213884.3-201ENST00000563833 479 ntBASIC33.42■■■□□ 2.94
CHD2O14647 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC33.41■■■□□ 2.94
CHD2O14647 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CHD2O14647 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC33.41■■■□□ 2.94
CHD2O14647 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD2O14647 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CHD2O14647 ANKRD20A6P-201ENST00000618763 204 ntBASIC33.39■■■□□ 2.94
CHD2O14647 AL355001.2-201ENST00000620617 1191 ntBASIC33.39■■■□□ 2.94
CHD2O14647 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CHD2O14647 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD2O14647 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CHD2O14647 MIR6722-201ENST00000617286 78 ntBASIC33.39■■■□□ 2.94
CHD2O14647 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD2O14647 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD2O14647 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC33.38■■■□□ 2.93
CHD2O14647 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC33.38■■■□□ 2.93
CHD2O14647 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD2O14647 AL136967.2-201ENST00000623968 743 ntBASIC33.38■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms