Protein–RNA interactions for Protein: O00425

IGF2BP3, Insulin-like growth factor 2 mRNA-binding protein 3, humanhuman

Known RBP eCLIP

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGF2BP3O00425 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.699e-6■■■□□ 17.5
IGF2BP3O00425 PTPN12-202ENST00000407343 704 ntTSL 39.67□□□□□ -0.869e-6■■■□□ 17.5
IGF2BP3O00425 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.92□□□□□ -0.989e-6■■■□□ 17.5
IGF2BP3O00425 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.999e-6■■■□□ 17.5
IGF2BP3O00425 DPY19L3-209ENST00000592142 5968 ntTSL 1 (best)8.03□□□□□ -1.129e-6■■■□□ 17.5
IGF2BP3O00425 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.159e-6■■■□□ 17.5
IGF2BP3O00425 ANXA5-205ENST00000509648 1083 ntTSL 25.65□□□□□ -1.59e-6■■■□□ 17.5
IGF2BP3O00425 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.58□□□□□ -1.689e-6■■■□□ 17.5
IGF2BP3O00425 FGFR1-236ENST00000531196 842 ntTSL 313.52□□□□□ -0.259e-8■■■□□ 17.5
IGF2BP3O00425 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.14■□□□□ 0.821e-8■■■□□ 17.5
IGF2BP3O00425 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.641e-8■■■□□ 17.5
IGF2BP3O00425 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)14.54□□□□□ -0.081e-8■■■□□ 17.5
IGF2BP3O00425 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.033e-6■■■□□ 17.4
IGF2BP3O00425 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC13.23□□□□□ -0.293e-6■■■□□ 17.4
IGF2BP3O00425 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC12.61□□□□□ -0.393e-6■■■□□ 17.4
IGF2BP3O00425 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.485e-8■■■□□ 17.4
IGF2BP3O00425 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.923e-7■■■□□ 17.4
IGF2BP3O00425 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.633e-7■■■□□ 17.4
IGF2BP3O00425 MGAT4B-216ENST00000520969 1096 ntTSL 326.57■■□□□ 1.846e-6■■■□□ 17.4
IGF2BP3O00425 MGAT4B-205ENST00000518778 1568 ntTSL 1 (best)24.54■■□□□ 1.526e-6■■■□□ 17.4
IGF2BP3O00425 MGAT4B-209ENST00000519836 1686 ntTSL 1 (best)23.31■■□□□ 1.326e-6■■■□□ 17.4
IGF2BP3O00425 CXCL16-202ENST00000573123 589 ntAPPRIS ALT2 TSL 222.16■■□□□ 1.146e-6■■■□□ 17.4
IGF2BP3O00425 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.116e-6■■■□□ 17.4
IGF2BP3O00425 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.036e-6■■■□□ 17.4
IGF2BP3O00425 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.626e-6■■■□□ 17.4
IGF2BP3O00425 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.99■□□□□ 0.476e-6■■■□□ 17.4
IGF2BP3O00425 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.93■□□□□ 0.36e-6■■■□□ 17.4
IGF2BP3O00425 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.096e-6■■■□□ 17.4
IGF2BP3O00425 CXCL16-204ENST00000575168 619 ntTSL 514.4□□□□□ -0.16e-6■■■□□ 17.4
IGF2BP3O00425 CSNK2A2-203ENST00000563307 4978 ntTSL 313.29□□□□□ -0.286e-6■■■□□ 17.4
IGF2BP3O00425 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.396e-6■■■□□ 17.4
IGF2BP3O00425 CSNK2A2-205ENST00000566813 1569 ntTSL 511.28□□□□□ -0.66e-6■■■□□ 17.4
IGF2BP3O00425 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.766e-6■■■□□ 17.4
IGF2BP3O00425 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.796e-6■■■□□ 17.4
IGF2BP3O00425 CSNK2A2-206ENST00000567730 947 ntTSL 39.55□□□□□ -0.886e-6■■■□□ 17.4
IGF2BP3O00425 SEC23A-209ENST00000555363 704 ntTSL 28.83□□□□□ -16e-6■■■□□ 17.4
IGF2BP3O00425 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.236e-6■■■□□ 17.4
IGF2BP3O00425 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.626e-6■■■□□ 17.4
IGF2BP3O00425 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.13□□□□□ -1.756e-6■■■□□ 17.4
IGF2BP3O00425 SEC23A-207ENST00000554615 3813 ntTSL 1 (best)3.57□□□□□ -1.846e-6■■■□□ 17.4
IGF2BP3O00425 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.21■■□□□ 1.635e-10■■■□□ 17.3
IGF2BP3O00425 CAPNS1-202ENST00000586851 616 ntTSL 38.23□□□□□ -1.095e-10■■■□□ 17.3
IGF2BP3O00425 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.31e-6■■■□□ 17.3
IGF2BP3O00425 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.222e-6■■■□□ 17.3
IGF2BP3O00425 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.13□□□□□ -0.312e-6■■■□□ 17.3
IGF2BP3O00425 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.442e-6■■■□□ 17.3
IGF2BP3O00425 HDLBP-202ENST00000373292 3297 ntTSL 512.2□□□□□ -0.462e-6■■■□□ 17.3
IGF2BP3O00425 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.792e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)28.14■■■□□ 2.13e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-207ENST00000537275 1508 ntTSL 1 (best)28.14■■■□□ 2.13e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.14■■■□□ 2.13e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.92■■□□□ 1.743e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.42■■□□□ 1.53e-6■■■□□ 17.3
IGF2BP3O00425 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.443e-6■■■□□ 17.3
IGF2BP3O00425 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.011e-8■■■□□ 17.3
IGF2BP3O00425 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC13.17□□□□□ -0.31e-8■■■□□ 17.3
IGF2BP3O00425 ST6GAL1-220ENST00000470633 4893 ntTSL 27.66□□□□□ -1.181e-8■■■□□ 17.3
IGF2BP3O00425 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.251e-8■■■□□ 17.3
IGF2BP3O00425 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■■□□ 17.2
IGF2BP3O00425 ADCY9-207ENST00000576936 697 ntTSL 516.19■□□□□ 0.182e-6■■■□□ 17.2
IGF2BP3O00425 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.19e-9■■■□□ 17.2
IGF2BP3O00425 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.22□□□□□ -0.139e-9■■■□□ 17.2
IGF2BP3O00425 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.159e-9■■■□□ 17.2
IGF2BP3O00425 FGG-206ENST00000443553 789 ntTSL 58.35□□□□□ -1.072e-6■■■□□ 17.2
IGF2BP3O00425 FGG-210ENST00000473393 996 ntTSL 27.88□□□□□ -1.152e-6■■■□□ 17.2
IGF2BP3O00425 FGG-208ENST00000465336 722 ntTSL 27.43□□□□□ -1.222e-6■■■□□ 17.2
IGF2BP3O00425 FGG-202ENST00000393846 641 ntTSL 27.38□□□□□ -1.232e-6■■■□□ 17.2
IGF2BP3O00425 FGG-207ENST00000464532 703 ntTSL 25.8□□□□□ -1.482e-6■■■□□ 17.2
IGF2BP3O00425 FGG-211ENST00000484695 354 ntTSL 24.04□□□□□ -1.762e-6■■■□□ 17.2
IGF2BP3O00425 SLC38A2-212ENST00000552703 528 ntTSL 27.79□□□□□ -1.163e-6■■■□□ 17.2
IGF2BP3O00425 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.015e-7■■■□□ 17.1
IGF2BP3O00425 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.095e-7■■■□□ 17.1
IGF2BP3O00425 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.66■□□□□ 0.264e-8■■■□□ 17.1
IGF2BP3O00425 FABP1-204ENST00000495375 2084 ntTSL 315.54■□□□□ 0.084e-8■■■□□ 17.1
IGF2BP3O00425 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.784e-8■■■□□ 17.1
IGF2BP3O00425 FABP1-203ENST00000472846 546 ntTSL 29.85□□□□□ -0.834e-8■■■□□ 17.1
IGF2BP3O00425 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.7□□□□□ -1.345e-18■■■□□ 17.1
IGF2BP3O00425 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.51■□□□□ 0.877e-8■■■□□ 17.1
IGF2BP3O00425 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.767e-8■■■□□ 17.1
IGF2BP3O00425 EIF1-202ENST00000462917 2170 ntTSL 1 (best)19.94■□□□□ 0.781e-5■■■□□ 17.1
IGF2BP3O00425 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.541e-5■■■□□ 17.1
IGF2BP3O00425 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.491e-5■■■□□ 17.1
IGF2BP3O00425 EIF1-201ENST00000310837 1120 ntTSL 1 (best)10.91□□□□□ -0.661e-5■■■□□ 17.1
IGF2BP3O00425 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.93□□□□□ -0.981e-5■■■□□ 17.1
IGF2BP3O00425 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.171e-5■■■□□ 17.1
IGF2BP3O00425 EIF1-205ENST00000482111 1428 ntTSL 27.69□□□□□ -1.181e-5■■■□□ 17.1
IGF2BP3O00425 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.661e-7■■■□□ 17.1
IGF2BP3O00425 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.681e-7■■■□□ 17.1
IGF2BP3O00425 KHSRP-205ENST00000595223 956 ntTSL 521.81■■□□□ 1.081e-7■■■□□ 17.1
IGF2BP3O00425 KHSRP-203ENST00000594745 379 ntTSL 318.11■□□□□ 0.491e-7■■■□□ 17.1
IGF2BP3O00425 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.136e-7■■■□□ 17.1
IGF2BP3O00425 RRP1B-202ENST00000470886 4634 ntTSL 211.1□□□□□ -0.636e-7■■■□□ 17.1
IGF2BP3O00425 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91e-6■■■□□ 17
IGF2BP3O00425 SLC1A2-205ENST00000464522 607 ntTSL 37.01□□□□□ -1.291e-6■■■□□ 17
IGF2BP3O00425 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.341e-6■■■□□ 17
IGF2BP3O00425 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.441e-6■■■□□ 17
IGF2BP3O00425 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.247e-7■■■□□ 17
IGF2BP3O00425 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.88e-7■■■□□ 17
IGF2BP3O00425 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.72e-6■■■□□ 17
IGF2BP3O00425 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.712e-6■■■□□ 17
Retrieved 100 of 3,649 protein–RNA pairs in 29.9 ms