RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 CHIC1Q5VXU3 224 aa13.01□□□□□ -0.33
PTPN12-206ENST00000435495 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
PTPN12-206ENST00000435495 PHF23Q9BUL5 403 aaPredicted RBP11.74□□□□□ -0.53
PTPN12-206ENST00000435495 PLPPR3Q6T4P5 718 aa10.79□□□□□ -0.68
PTPN12-206ENST00000435495 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
PTPN12-206ENST00000435495 SENP3Q9H4L4 574 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-206ENST00000435495 ADRA2BP18089 450 aa10.48□□□□□ -0.73
PTPN12-206ENST00000435495 KCNA4P22459 653 aa10.42□□□□□ -0.74
PTPN12-206ENST00000435495 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
PTPN12-206ENST00000435495 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
PTPN12-206ENST00000435495 FOXD1Q16676 465 aa9.92□□□□□ -0.82
PTPN12-206ENST00000435495 SLC4A1APQ9BWU0 796 aaKnown RBP9.87□□□□□ -0.83
PTPN12-206ENST00000435495 PPP4R3CPQ6ZMV5 832 aa9.7□□□□□ -0.86
PTPN12-206ENST00000435495 ZBTB22O15209 634 aa9.69□□□□□ -0.86
PTPN12-206ENST00000435495 NPM3O75607 178 aaKnown RBP9.57□□□□□ -0.88
PTPN12-206ENST00000435495 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
PTPN12-206ENST00000435495 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
PTPN12-206ENST00000435495 PIAS4Q8N2W9 510 aaPredicted RBP9.5□□□□□ -0.89
PTPN12-206ENST00000435495 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.91
PTPN12-206ENST00000435495 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-206ENST00000435495 FOXD4L1Q9NU39 408 aa9.16□□□□□ -0.94
PTPN12-206ENST00000435495 CNKSR2Q8WXI2 1034 aa9.15□□□□□ -0.94
PTPN12-206ENST00000435495 MAPK8IP2Q13387 824 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-206ENST00000435495 FKBP8Q14318 412 aa9.04□□□□□ -0.96
PTPN12-206ENST00000435495 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
PTPN12-206ENST00000435495 SCAF1Q9H7N4 1312 aaKnown RBP8.9□□□□□ -0.99
PTPN12-206ENST00000435495 RNF216Q9NWF9 866 aaPredicted RBP8.81□□□□□ -1
PTPN12-206ENST00000435495 DNAJC5BQ9UF47 199 aa8.78□□□□□ -1
PTPN12-206ENST00000435495 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-206ENST00000435495 ATF5Q9Y2D1 282 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-206ENST00000435495 MYCNP04198 464 aaPredicted RBP8.64□□□□□ -1.03
PTPN12-206ENST00000435495 HOXD11P31277 338 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-206ENST00000435495 MSH5O43196 834 aa8.6□□□□□ -1.03
PTPN12-206ENST00000435495 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
PTPN12-206ENST00000435495 ATXN8OSP0DMR3 200 aa8.57□□□□□ -1.04
PTPN12-206ENST00000435495 DMRT2Q9Y5R5 561 aa8.55□□□□□ -1.04
PTPN12-206ENST00000435495 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-206ENST00000435495 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
PTPN12-206ENST00000435495 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
PTPN12-206ENST00000435495 TAOK2Q9UL54 1235 aa8.42□□□□□ -1.06
PTPN12-206ENST00000435495 FBLN2P98095 1184 aa8.38□□□□□ -1.07
PTPN12-206ENST00000435495 DCAF8L1A6NGE4 600 aa8.37□□□□□ -1.07
PTPN12-206ENST00000435495 IFNLR1Q8IU57 520 aaPredicted RBP8.36□□□□□ -1.07
PTPN12-206ENST00000435495 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
PTPN12-206ENST00000435495 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
PTPN12-206ENST00000435495 BCANQ96GW7 911 aa8.34□□□□□ -1.07
PTPN12-206ENST00000435495 PKD2Q13563 968 aa8.33□□□□□ -1.08
PTPN12-206ENST00000435495 U3KPZ7 1027 aaPredicted RBP8.32□□□□□ -1.08
PTPN12-206ENST00000435495 VASPP50552 380 aaPredicted RBP8.3□□□□□ -1.08
PTPN12-206ENST00000435495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■□□□□ 10.5
PTPN12-206ENST00000435495 SPDYE4A6NLX3 237 aa8.29□□□□□ -1.08
PTPN12-206ENST00000435495 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
PTPN12-206ENST00000435495 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPN12-206ENST00000435495 ZNF219Q9P2Y4 722 aaPredicted RBP8.24□□□□□ -1.09
PTPN12-206ENST00000435495 FBXO3Q9UK99 471 aa8.22□□□□□ -1.09
PTPN12-206ENST00000435495 CFAP44Q96MT7 982 aa8.2□□□□□ -1.1
PTPN12-206ENST00000435495 SAMD1Q6SPF0 538 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-206ENST00000435495 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-206ENST00000435495 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
PTPN12-206ENST00000435495 TIMELESSQ9UNS1 1208 aa8.16□□□□□ -1.1
PTPN12-206ENST00000435495 PROM2Q8N271 834 aa8.15□□□□□ -1.1
PTPN12-206ENST00000435495 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
PTPN12-206ENST00000435495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.09□□□□□ -1.11
PTPN12-206ENST00000435495 HNRNPUL2Q1KMD3 747 aaKnown RBP8.09□□□□□ -1.11
PTPN12-206ENST00000435495 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
PTPN12-206ENST00000435495 RGL2O15211 777 aa8.09□□□□□ -1.11
PTPN12-206ENST00000435495 ARXQ96QS3 562 aa8.09□□□□□ -1.11
PTPN12-206ENST00000435495 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
PTPN12-206ENST00000435495 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-206ENST00000435495 BBXQ8WY36 941 aaPredicted RBP8.02□□□□□ -1.12
PTPN12-206ENST00000435495 SPINK5Q9NQ38 1064 aaPredicted RBP8.02□□□□□ -1.12
PTPN12-206ENST00000435495 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
PTPN12-206ENST00000435495 KLHL34Q8N239 644 aa8□□□□□ -1.13
PTPN12-206ENST00000435495 POTEDQ86YR6 584 aa8□□□□□ -1.13
PTPN12-206ENST00000435495 POLA2Q14181 598 aa7.99□□□□□ -1.13
PTPN12-206ENST00000435495 CHGAP10645 457 aaKnown RBP7.95□□□□□ -1.14
PTPN12-206ENST00000435495 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
PTPN12-206ENST00000435495 SPOCK2Q92563 424 aa7.92□□□□□ -1.14
PTPN12-206ENST00000435495 GTF3C3Q9Y5Q9 886 aa7.88□□□□□ -1.15
PTPN12-206ENST00000435495 APLP2Q06481 763 aa7.87□□□□□ -1.15
PTPN12-206ENST00000435495 NBR1Q14596 966 aa7.87□□□□□ -1.15
PTPN12-206ENST00000435495 ABCB7O75027 752 aa7.87□□□□□ -1.15
PTPN12-206ENST00000435495 CIZ1Q9ULV3 898 aaPredicted RBP7.85□□□□□ -1.15
PTPN12-206ENST00000435495 PLCD3Q8N3E9 789 aa7.85□□□□□ -1.15
PTPN12-206ENST00000435495 HOMEZQ8IX15 550 aa7.84□□□□□ -1.15
PTPN12-206ENST00000435495 RNF25Q96BH1 459 aaPredicted RBP7.84□□□□□ -1.15
PTPN12-206ENST00000435495 CAPN15O75808 1086 aa7.81□□□□□ -1.16
PTPN12-206ENST00000435495 NKX1-1Q15270 411 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-206ENST00000435495 MIER1Q8N108 512 aa7.8□□□□□ -1.16
PTPN12-206ENST00000435495 RANGAP1P46060 587 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-206ENST00000435495 DNAJC5Q9H3Z4 198 aa7.79□□□□□ -1.16
PTPN12-206ENST00000435495 TTBK1Q5TCY1 1321 aaPredicted RBP7.77□□□□□ -1.16
PTPN12-206ENST00000435495 OSCARQ8IYS5 282 aa7.76□□□□□ -1.17
PTPN12-206ENST00000435495 PELP1Q8IZL8 1130 aaKnown RBP7.76□□□□□ -1.17
PTPN12-206ENST00000435495 ZNF692Q9BU19 519 aaPredicted RBP7.74□□□□□ -1.17
PTPN12-206ENST00000435495 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
PTPN12-206ENST00000435495 PABPN1Q86U42 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTPN12-206ENST00000435495 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
PTPN12-206ENST00000435495 HS6ST3Q8IZP7 471 aa7.7□□□□□ -1.18
PTPN12-206ENST00000435495 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms