RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 AEBP2Q6ZN18 517 aaPredicted RBP32.15■■■□□ 2.74
SEC23A-209ENST00000555363 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
SEC23A-209ENST00000555363 SENP3Q9H4L4 574 aaPredicted RBP27.51■■□□□ 1.99
SEC23A-209ENST00000555363 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
SEC23A-209ENST00000555363 FOXD1Q16676 465 aa25.54■■□□□ 1.68
SEC23A-209ENST00000555363 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
SEC23A-209ENST00000555363 ADRA2BP18089 450 aa24.06■■□□□ 1.44
SEC23A-209ENST00000555363 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
SEC23A-209ENST00000555363 PIAS4Q8N2W9 510 aaPredicted RBP24.03■■□□□ 1.44
SEC23A-209ENST00000555363 MSH5O43196 834 aa23.89■■□□□ 1.41
SEC23A-209ENST00000555363 POTEDQ86YR6 584 aa22.8■■□□□ 1.24
SEC23A-209ENST00000555363 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
SEC23A-209ENST00000555363 MAPK8IP2Q13387 824 aaPredicted RBP22■■□□□ 1.11
SEC23A-209ENST00000555363 DMRT2Q9Y5R5 561 aa21.81■■□□□ 1.08
SEC23A-209ENST00000555363 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
SEC23A-209ENST00000555363 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
SEC23A-209ENST00000555363 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
SEC23A-209ENST00000555363 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
SEC23A-209ENST00000555363 HOXD11P31277 338 aaPredicted RBP21.08■□□□□ 0.97
SEC23A-209ENST00000555363 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
SEC23A-209ENST00000555363 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
SEC23A-209ENST00000555363 KCNA4P22459 653 aa20.55■□□□□ 0.88
SEC23A-209ENST00000555363 CACNB1Q02641 598 aaPredicted RBP20.39■□□□□ 0.85
SEC23A-209ENST00000555363 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
SEC23A-209ENST00000555363 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
SEC23A-209ENST00000555363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
SEC23A-209ENST00000555363 C1QBPQ07021 282 aaKnown RBP20.1■□□□□ 0.81
SEC23A-209ENST00000555363 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
SEC23A-209ENST00000555363 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
SEC23A-209ENST00000555363 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
SEC23A-209ENST00000555363 CAPN15O75808 1086 aa19.45■□□□□ 0.7
SEC23A-209ENST00000555363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
SEC23A-209ENST00000555363 HNRNPUL2Q1KMD3 747 aaKnown RBP19.38■□□□□ 0.69
SEC23A-209ENST00000555363 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
SEC23A-209ENST00000555363 APLP2Q06481 763 aa19.37■□□□□ 0.69
SEC23A-209ENST00000555363 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
SEC23A-209ENST00000555363 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
SEC23A-209ENST00000555363 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
SEC23A-209ENST00000555363 DSG3P32926 999 aa19.14■□□□□ 0.65
SEC23A-209ENST00000555363 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
SEC23A-209ENST00000555363 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
SEC23A-209ENST00000555363 ABCB7O75027 752 aa18.99■□□□□ 0.63
SEC23A-209ENST00000555363 ZBTB22O15209 634 aa18.82■□□□□ 0.6
SEC23A-209ENST00000555363 POLA2Q14181 598 aa18.69■□□□□ 0.58
SEC23A-209ENST00000555363 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
SEC23A-209ENST00000555363 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
SEC23A-209ENST00000555363 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
SEC23A-209ENST00000555363 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
SEC23A-209ENST00000555363 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
SEC23A-209ENST00000555363 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
SEC23A-209ENST00000555363 FBLN2P98095 1184 aa18.08■□□□□ 0.48
SEC23A-209ENST00000555363 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
SEC23A-209ENST00000555363 POTEHQ6S545 545 aa17.96■□□□□ 0.47
SEC23A-209ENST00000555363 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
SEC23A-209ENST00000555363 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
SEC23A-209ENST00000555363 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
SEC23A-209ENST00000555363 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
SEC23A-209ENST00000555363 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
SEC23A-209ENST00000555363 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
SEC23A-209ENST00000555363 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
SEC23A-209ENST00000555363 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
SEC23A-209ENST00000555363 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
SEC23A-209ENST00000555363 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
SEC23A-209ENST00000555363 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
SEC23A-209ENST00000555363 SPDYE1Q8NFV5 336 aaPredicted RBP17.45■□□□□ 0.38
SEC23A-209ENST00000555363 PIP4P2Q8N4L2 257 aa17.42■□□□□ 0.38
SEC23A-209ENST00000555363 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEC23A-209ENST00000555363 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEC23A-209ENST00000555363 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
SEC23A-209ENST00000555363 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
SEC23A-209ENST00000555363 PRKAR2AP13861 404 aaKnown RBP17.17■□□□□ 0.34
SEC23A-209ENST00000555363 HAX1O00165 279 aa17.13■□□□□ 0.33
SEC23A-209ENST00000555363 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
SEC23A-209ENST00000555363 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
SEC23A-209ENST00000555363 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
SEC23A-209ENST00000555363 FARP1Q9Y4F1 1045 aaPredicted RBP16.78■□□□□ 0.28
SEC23A-209ENST00000555363 EVX2Q03828 476 aa16.77■□□□□ 0.28
SEC23A-209ENST00000555363 C19orf67A6NJJ6 358 aa16.76■□□□□ 0.27
SEC23A-209ENST00000555363 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
SEC23A-209ENST00000555363 PROM2Q8N271 834 aa16.66■□□□□ 0.26
SEC23A-209ENST00000555363 CD44P16070 742 aaKnown RBP16.64■□□□□ 0.25
SEC23A-209ENST00000555363 FKBP8Q14318 412 aa16.64■□□□□ 0.25
SEC23A-209ENST00000555363 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
SEC23A-209ENST00000555363 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
SEC23A-209ENST00000555363 GABBR2O75899 941 aa16.49■□□□□ 0.23
SEC23A-209ENST00000555363 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
SEC23A-209ENST00000555363 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
SEC23A-209ENST00000555363 MIER1Q8N108 512 aa16.45■□□□□ 0.22
SEC23A-209ENST00000555363 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
SEC23A-209ENST00000555363 PLCD3Q8N3E9 789 aa16.38■□□□□ 0.21
SEC23A-209ENST00000555363 CLCN6P51797 869 aa16.35■□□□□ 0.21
SEC23A-209ENST00000555363 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
SEC23A-209ENST00000555363 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
SEC23A-209ENST00000555363 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
SEC23A-209ENST00000555363 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
SEC23A-209ENST00000555363 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
SEC23A-209ENST00000555363 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
SEC23A-209ENST00000555363 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
SEC23A-209ENST00000555363 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
SEC23A-209ENST00000555363 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms