Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX39AO00148 AC120024.1-201ENST00000562672 995 ntBASIC26.66■■□□□ 1.86
DDX39AO00148 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
DDX39AO00148 FOXO3B-201ENST00000395675 1928 ntBASIC26.66■■□□□ 1.86
DDX39AO00148 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
DDX39AO00148 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
DDX39AO00148 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.65■■□□□ 1.86
DDX39AO00148 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX39AO00148 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.65■■□□□ 1.86
DDX39AO00148 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.65■■□□□ 1.86
DDX39AO00148 THA1P-201ENST00000590384 1145 ntBASIC26.65■■□□□ 1.86
DDX39AO00148 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.65■■□□□ 1.86
DDX39AO00148 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
DDX39AO00148 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX39AO00148 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DDX39AO00148 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX39AO00148 AC145676.1-201ENST00000514988 2004 ntBASIC26.64■■□□□ 1.86
DDX39AO00148 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
DDX39AO00148 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
DDX39AO00148 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.64■■□□□ 1.85
DDX39AO00148 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX39AO00148 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX39AO00148 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX39AO00148 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX39AO00148 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX39AO00148 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
DDX39AO00148 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 KRT18P24-201ENST00000344739 1156 ntBASIC26.61■■□□□ 1.85
DDX39AO00148 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.61■■□□□ 1.85
DDX39AO00148 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX39AO00148 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX39AO00148 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
DDX39AO00148 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
DDX39AO00148 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX39AO00148 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX39AO00148 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
DDX39AO00148 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
DDX39AO00148 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX39AO00148 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX39AO00148 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.59■■□□□ 1.85
DDX39AO00148 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX39AO00148 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX39AO00148 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.59■■□□□ 1.85
DDX39AO00148 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX39AO00148 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX39AO00148 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX39AO00148 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX39AO00148 AC239859.2-201ENST00000444165 318 ntBASIC26.58■■□□□ 1.85
DDX39AO00148 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
DDX39AO00148 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.57■■□□□ 1.84
DDX39AO00148 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX39AO00148 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX39AO00148 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.57■■□□□ 1.84
DDX39AO00148 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.57■■□□□ 1.84
DDX39AO00148 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX39AO00148 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX39AO00148 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.56■■□□□ 1.84
DDX39AO00148 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
DDX39AO00148 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.56■■□□□ 1.84
DDX39AO00148 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.56■■□□□ 1.84
DDX39AO00148 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX39AO00148 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX39AO00148 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX39AO00148 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX39AO00148 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
DDX39AO00148 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX39AO00148 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
DDX39AO00148 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX39AO00148 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
DDX39AO00148 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX39AO00148 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
DDX39AO00148 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
DDX39AO00148 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.53■■□□□ 1.84
DDX39AO00148 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX39AO00148 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX39AO00148 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX39AO00148 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX39AO00148 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX39AO00148 MIR4281-201ENST00000580852 62 ntBASIC26.52■■□□□ 1.84
DDX39AO00148 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.52■■□□□ 1.84
DDX39AO00148 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.51■■□□□ 1.84
DDX39AO00148 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX39AO00148 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
DDX39AO00148 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX39AO00148 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms