Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UPK3BL1B0FP48 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.93■■□□□ 1.42
UPK3BL1B0FP48 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UPK3BL1B0FP48 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
UPK3BL1B0FP48 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UPK3BL1B0FP48 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UPK3BL1B0FP48 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
UPK3BL1B0FP48 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UPK3BL1B0FP48 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 KRT125P-201ENST00000546827 989 ntBASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UPK3BL1B0FP48 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UPK3BL1B0FP48 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
UPK3BL1B0FP48 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
UPK3BL1B0FP48 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.89■■□□□ 1.41
UPK3BL1B0FP48 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.89■■□□□ 1.41
UPK3BL1B0FP48 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
UPK3BL1B0FP48 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
UPK3BL1B0FP48 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.88■■□□□ 1.41
UPK3BL1B0FP48 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 MIR638-201ENST00000385237 100 ntBASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 AC091060.1-201ENST00000623524 1766 ntBASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.87■■□□□ 1.41
UPK3BL1B0FP48 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 MIR4787-201ENST00000607364 84 ntBASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 DUSP8P4-201ENST00000399538 1761 ntBASIC23.86■■□□□ 1.41
UPK3BL1B0FP48 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 BX664725.1-201ENST00000438252 379 ntBASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 AC022616.5-201ENST00000518796 181 ntBASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 AC097639.1-201ENST00000565519 1891 ntBASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.85■■□□□ 1.41
UPK3BL1B0FP48 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.84■■□□□ 1.41
UPK3BL1B0FP48 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.83■■□□□ 1.41
UPK3BL1B0FP48 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.83■■□□□ 1.41
UPK3BL1B0FP48 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 AC145676.1-201ENST00000514988 2004 ntBASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.82■■□□□ 1.4
UPK3BL1B0FP48 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UPK3BL1B0FP48 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPK3BL1B0FP48 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPK3BL1B0FP48 UNC93B8-201ENST00000511903 705 ntBASIC23.8■■□□□ 1.4
UPK3BL1B0FP48 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.8■■□□□ 1.4
UPK3BL1B0FP48 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UPK3BL1B0FP48 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPK3BL1B0FP48 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms