Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.22■■□□□ 1.79
SPDYE4A6NLX3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 AC018755.3-202ENST00000596210 929 ntBASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 AC074183.2-201ENST00000623112 922 ntBASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 LINC00543-201ENST00000567234 1845 ntBASIC26.21■■□□□ 1.79
SPDYE4A6NLX3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SPDYE4A6NLX3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SPDYE4A6NLX3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SPDYE4A6NLX3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.2■■□□□ 1.78
SPDYE4A6NLX3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.2■■□□□ 1.78
SPDYE4A6NLX3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPDYE4A6NLX3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 RAP2CP1-202ENST00000605179 643 ntBASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 AC079834.2-201ENST00000609776 1949 ntBASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE4A6NLX3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE4A6NLX3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 SPCS2P3-201ENST00000500401 656 ntBASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
SPDYE4A6NLX3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.16■■□□□ 1.78
SPDYE4A6NLX3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.15■■□□□ 1.78
SPDYE4A6NLX3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE4A6NLX3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.14■■□□□ 1.78
SPDYE4A6NLX3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SPDYE4A6NLX3 AC068473.5-201ENST00000616428 2072 ntBASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
SPDYE4A6NLX3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.12■■□□□ 1.77
SPDYE4A6NLX3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 AP002414.2-202ENST00000590929 1450 ntBASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 AC092803.2-201ENST00000564287 1899 ntBASIC26.11■■□□□ 1.77
SPDYE4A6NLX3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
SPDYE4A6NLX3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPDYE4A6NLX3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SPDYE4A6NLX3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.1■■□□□ 1.77
SPDYE4A6NLX3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SPDYE4A6NLX3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE4A6NLX3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE4A6NLX3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE4A6NLX3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE4A6NLX3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPDYE4A6NLX3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 AC009299.2-201ENST00000482477 511 ntBASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPDYE4A6NLX3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SPDYE4A6NLX3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPDYE4A6NLX3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms