Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV38-1A0A0B4J264 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV38-1A0A0B4J264 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV38-1A0A0B4J264 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV38-1A0A0B4J264 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV38-1A0A0B4J264 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV38-1A0A0B4J264 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 AC022616.5-201ENST00000518796 181 ntBASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV38-1A0A0B4J264 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 AL592295.1-201ENST00000400984 884 ntBASIC19.83■□□□□ 0.77
TRAV38-1A0A0B4J264 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV38-1A0A0B4J264 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV38-1A0A0B4J264 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV38-1A0A0B4J264 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 FOXO3B-201ENST00000395675 1928 ntBASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 YBX1P4-201ENST00000392794 808 ntBASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV38-1A0A0B4J264 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV38-1A0A0B4J264 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV38-1A0A0B4J264 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV38-1A0A0B4J264 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV38-1A0A0B4J264 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV38-1A0A0B4J264 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 PVT1_1.1-201ENST00000615125 194 ntBASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV38-1A0A0B4J264 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 MIR4508-201ENST00000584178 70 ntBASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV38-1A0A0B4J264 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV38-1A0A0B4J264 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 AC020928.2-201ENST00000588717 2197 ntBASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV38-1A0A0B4J264 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV38-1A0A0B4J264 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV38-1A0A0B4J264 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV38-1A0A0B4J264 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms