Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 NME2P1-201ENST00000426182 414 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 POU5F1P6-201ENST00000466990 990 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 DOC2GP-202ENST00000514950 1163 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AC104794.3-201ENST00000566840 1248 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 MIR4321-201ENST00000592276 80 ntBASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NCKAP1Q9Y2A7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FLJ16779-201ENST00000612722 7638 ntBASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 GNAQP1-201ENST00000444815 1067 ntBASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 AC093004.1-201ENST00000508850 424 ntBASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NCKAP1Q9Y2A7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 CU639417.3-201ENST00000624240 1404 ntBASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 AC098614.1-201ENST00000368528 745 ntBASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 AC114501.2-201ENST00000439631 535 ntBASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NCKAP1Q9Y2A7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms