Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 RASA4DP-201ENST00000460726 1199 ntBASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC104390.1-201ENST00000555663 520 ntBASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 KRT8P7-201ENST00000533003 1432 ntBASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 AC013726.1-201ENST00000563747 2285 ntBASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 FRMD8P1-201ENST00000440433 1524 ntBASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBQLN2Q9UHD9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AL671277.2-201ENST00000458060 996 ntBASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AC008687.5-201ENST00000593746 558 ntBASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 BEND3P1-201ENST00000421591 1944 ntBASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms