Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 KRT8P44-201ENST00000441609 1350 ntBASIC16.11■□□□□ 0.17
SSU72Q9NP77 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.11■□□□□ 0.17
SSU72Q9NP77 WASH6P-202ENST00000359512 1437 ntBASIC16.11■□□□□ 0.17
SSU72Q9NP77 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
SSU72Q9NP77 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 AC126365.1-201ENST00000578585 1514 ntBASIC16.1■□□□□ 0.17
SSU72Q9NP77 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 AC073621.1-201ENST00000392730 636 ntBASIC16.1■□□□□ 0.17
SSU72Q9NP77 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
SSU72Q9NP77 AC107918.4-202ENST00000641623 219 ntBASIC16.1■□□□□ 0.17
SSU72Q9NP77 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
SSU72Q9NP77 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSU72Q9NP77 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 IGHV3-65-201ENST00000523210 341 ntBASIC16.09■□□□□ 0.17
SSU72Q9NP77 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 MIR4321-201ENST00000592276 80 ntBASIC16.09■□□□□ 0.17
SSU72Q9NP77 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 AL390755.1-201ENST00000623716 2027 ntBASIC16.09■□□□□ 0.17
SSU72Q9NP77 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SSU72Q9NP77 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSU72Q9NP77 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.08■□□□□ 0.17
SSU72Q9NP77 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.08■□□□□ 0.17
SSU72Q9NP77 AC023908.3-201ENST00000564211 3047 ntBASIC16.08■□□□□ 0.17
SSU72Q9NP77 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SSU72Q9NP77 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SSU72Q9NP77 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SSU72Q9NP77 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSU72Q9NP77 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SSU72Q9NP77 AGAP7P-201ENST00000582299 2062 ntBASIC16.08■□□□□ 0.16
SSU72Q9NP77 AGAP14-201ENST00000624701 2060 ntBASIC16.08■□□□□ 0.16
SSU72Q9NP77 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 HMGA1P7-201ENST00000406908 502 ntBASIC16.08■□□□□ 0.16
SSU72Q9NP77 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.08■□□□□ 0.16
SSU72Q9NP77 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSU72Q9NP77 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms