Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.08■□□□□ 0
UBQLN3Q9H347 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.08■□□□□ 0
UBQLN3Q9H347 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBQLN3Q9H347 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.07■□□□□ 0
UBQLN3Q9H347 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.07■□□□□ 0
UBQLN3Q9H347 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBQLN3Q9H347 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
UBQLN3Q9H347 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 AL513477.1-201ENST00000602865 2407 ntBASIC15.07■□□□□ 0
UBQLN3Q9H347 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBQLN3Q9H347 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.07■□□□□ 0
UBQLN3Q9H347 AC008267.7-201ENST00000624570 1194 ntBASIC15.07■□□□□ 0
UBQLN3Q9H347 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.07■□□□□ 0
UBQLN3Q9H347 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.07■□□□□ 0
UBQLN3Q9H347 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN3Q9H347 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
UBQLN3Q9H347 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.06■□□□□ 0
UBQLN3Q9H347 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 AC005237.2-201ENST00000434368 219 ntBASIC15.06■□□□□ 0
UBQLN3Q9H347 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.06■□□□□ 0
UBQLN3Q9H347 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.06■□□□□ 0
UBQLN3Q9H347 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.06■□□□□ 0
UBQLN3Q9H347 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.06■□□□□ 0
UBQLN3Q9H347 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
UBQLN3Q9H347 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBQLN3Q9H347 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN3Q9H347 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms