Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 AC233702.5-201ENST00000584107 538 ntBASIC13.2□□□□□ -0.3
NKX6-2Q9C056 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 AC113410.3-201ENST00000623366 203 ntBASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AC087481.3-201ENST00000602886 1894 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 GPR89P-201ENST00000407924 1495 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 HLA-L-209ENST00000420110 1011 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 MTCL1P1-201ENST00000446207 792 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 ECEL1P2-202ENST00000465689 757 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AC111152.3-201ENST00000569699 673 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AC004263.2-201ENST00000617183 678 ntBASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX6-2Q9C056 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 AC005562.1-201ENST00000583030 3219 ntBASIC13.18□□□□□ -0.3
NKX6-2Q9C056 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX6-2Q9C056 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms