Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 AC020658.6-201ENST00000623564 1870 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 MIR1224-201ENST00000408193 85 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
TRGV9Q99603 HNRNPDP1-201ENST00000439535 754 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 AC109635.5-201ENST00000533593 962 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.68□□□□□ -0.38
TRGV9Q99603 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRGV9Q99603 TMBIM7P-203ENST00000641617 1718 ntBASIC12.68□□□□□ -0.38
TRGV9Q99603 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV9Q99603 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV9Q99603 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV9Q99603 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV9Q99603 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV9Q99603 AL121912.1-201ENST00000603683 238 ntBASIC12.67□□□□□ -0.38
TRGV9Q99603 AC117500.6-201ENST00000624871 588 ntBASIC12.67□□□□□ -0.38
TRGV9Q99603 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 AC013268.4-201ENST00000637413 2228 ntBASIC12.67□□□□□ -0.38
TRGV9Q99603 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV9Q99603 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV9Q99603 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV9Q99603 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV9Q99603 PPT1-215ENST00000641471 2368 ntBASIC12.66□□□□□ -0.38
TRGV9Q99603 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV9Q99603 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV9Q99603 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms